Alternatives and similar repositories for BaitsTools

Users that are interested in BaitsTools are comparing it to the libraries listed below

• WeiWei060512 / NUMTs-detection
  Detecting NUMTs from WGS
  ☆12Updated last year
• z0on / tag-based_RNAseq
  Cost-efficient genome-wide gene expression profiling
  ☆16Updated 2 years ago
• lucieabergeron / vertebrate_rate
  Method used in the study on germline mutation rate estimation in 68 species of vertebrates.
  ☆14Updated 3 years ago
• Gabaldonlab / perSVade
  perSVade: personalized Structural Variation detection
  ☆40Updated last week
• pinbo / RgeneticMap
  Draw genetic map (linkage map) in R
  ☆12Updated 7 years ago
• MorrellLAB / File_Conversions
  Scripts to convert between file formats for various analyses
  ☆16Updated 2 months ago
• FemeniasM / ExplorATEproject
  R package to explore active transposable elements with RNA-seq data
  ☆20Updated 2 years ago
• hillerlab / CESAR2.0
  ☆28Updated 2 years ago
• tvkent / GERPplusplus
  GERP++ code from Sidow Lab modified by Kevin Thornton to compile properly.
  ☆21Updated 8 years ago
• hangelwen / miR-PREFeR
  microRNA PREdiction From small RNA-seq data
  ☆29Updated 7 years ago
• Rosemeis / HaploNet
  Haplotype and population structure inference using neural networks.
  ☆27Updated 7 months ago
• jonassibbesen / rpvg
  Method for inferring path posterior probabilities and abundances from pangenome graph read alignments
  ☆56Updated 6 months ago
• TomSkelly / MatchAnnot
  Python scripts for matching output of Pacific Biosciences IsoSeq RNA-seq pipeline to an annotation file.
  ☆23Updated 9 years ago
• DecodeGenetics / svimmer
  Structural variant merging tool
  ☆52Updated 10 months ago
• Nextomics / pipeline-for-isoseq
  A pipeline for isoseq
  ☆23Updated 7 years ago
• 4ureliek / TEanalysis
  Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.
  ☆27Updated 5 years ago
• LeanQ / SPLITREADER
  Split-read pipeline for the identification of non-reference TE insertions with TSDs
  ☆25Updated 4 years ago
• liu3zhenlab / homotools
  ☆27Updated 6 months ago
• FAANG / analysis-TAGADA
  GENE-SWitCH project RNA-Seq analysis pipeline
  ☆28Updated 4 months ago
• enormandeau / gawn
  Genome Annotation Without Nightmares
  ☆46Updated 5 months ago
• Sunhh / NGS_data_processing
  Tool set for processing fasta/fastq/table formated data. Usually they are perl scripts.
  ☆55Updated last month
• lauguma / GWideCodeML
  A Python package for testing evolutionary hypotheses in genome-wide approaches.
  ☆31Updated 4 years ago
• Bean061 / ptgaul
  chloroplast genome assembly using long reads data
  ☆13Updated last week
• eswlab / orphan-prediction
  methods for orphan gene prediction paper optimization
  ☆25Updated 3 years ago
• kensung-lab / INSurVeyor
  An insertion caller for Illumina paired-end WGS data.
  ☆23Updated 11 months ago
• sanjaynagi / rna-seq-pop
  Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data
  ☆18Updated 3 months ago
• tao-bioinfo / readfq
  A simple tool to calculate reads number and total base count in FASTQ file
  ☆21Updated 6 years ago
• dwinter / repeatR
  read and analyse RepeatMasker output
  ☆24Updated 2 years ago
• srbehera / DRAGEN_Analysis
  ☆33Updated last year
• Odinidoer / Annotation_GO.KEGG.COG
  整合型的对于生物学注释的信息/GO和KEGG全谱注释和富集
  ☆13Updated 7 years ago