Alternatives and similar repositories for MassOmics

Users that are interested in MassOmics are comparing it to the libraries listed below

• rformassspectrometry / MetaboAnnotation
  High level functionality to support and simplify metabolomics data annotation.
  ☆16Updated 3 weeks ago
• gggraca / MetaboAnnotatoR
  Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets
  ☆12Updated 3 years ago
• zhengfj1994 / MRM-Ion_Pair_Finder
  Defined MRM transitions from untargeted metabolomics data
  ☆10Updated last year
• yufree / pmd
  Paired Mass Distance(PMD) analysis for GC/LC-MS based nontarget analysis
  ☆10Updated last month
• idslme / IDSL.IPA
  Intrinsic Peak Analysis (IPA) pipeline for peak-picking in large-scale untargeted small molecule analysis including metabolomics, lipidom…
  ☆14Updated 2 years ago
• aberHRML / metabolighteR
  R Interface to the Metabolights REST API
  ☆11Updated 2 months ago
• QizhiSu / mspcompiler
  Compile Mass Spectral Libraries from Various Sources
  ☆17Updated last year
• stanstrup / QC4Metabolomics
  QC systems for metabolomics studies
  ☆10Updated 2 weeks ago
• sorenwacker / ms-peakonly
  Peak detection for untargeted metabolomics using Neural Network. High-level API based on peakonly by @Arseha.
  ☆16Updated last year
• zhengfj1994 / PPGB_MS2
  ☆10Updated 6 months ago
• aberHRML / classyfireR
  R Interface to the ClassyFire REST API
  ☆11Updated 4 months ago
• phenomecentre / peakPantheR
  On-instrument and post-acquisition targeted feature extraction
  ☆12Updated last year
• EMSL-Computing / PeakDecoder
  A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.
  ☆16Updated 2 years ago
• stanstrup / PredRet
  Shiny app for retention time prediction
  ☆9Updated 5 years ago
• yufree / xcmsrocker
  Rocker image for metabolomics data analysis
  ☆13Updated 3 weeks ago
• iomega / spec2vec_gnps_data_analysis
  Analysis and benchmarking of mass spectra similarity measures using gnps data set.
  ☆24Updated 3 years ago
• hhabra / metabCombiner
  metabCombiner R Package: Paired Untargeted Metabolomics Feature Matching & Data Concatenation
  ☆11Updated last year
• MRMkit / MRMkit
  ☆9Updated 2 weeks ago
• yguitton / metaMS
  data processing for MS-based metabolomics
  ☆15Updated 7 months ago
• bihealth / NeatMS
  NeatMS is an open source python package for untargeted LCMS signal labelling and filtering.
  ☆32Updated 3 years ago
• barupal / ChemRICH
  Chemical Similarity Enrichment analysis of metabolomics datasets
  ☆29Updated 11 months ago
• christophuv / PeakBot
  PeakBot - detection of chromatographic and mz profile-mode peaks in LC-HRMS data
  ☆18Updated 3 years ago
• pattilab / DecoID
  Metabolomics software for database-assisted deconvolution of MS/MS spectra
  ☆19Updated last year
• broadinstitute / bmxp
  The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …
  ☆12Updated last month
• rformassspectrometry / MetaboCoreUtils
  Core utilities for metabolomics.
  ☆9Updated last month
• kruvelab / MS2Tox
  MS2Tox is a machine learning tool for predicting ecotoxicity of unidentified chemicals in water by nontarget LC/HRMS
  ☆16Updated 6 months ago
• pattilab / PeakDetective
  ☆11Updated last year
• ZhuMetLab / MetImage
  Converting LC−MS-based Untargeted Metabolomics Data into Image towards Clinical Diagnosis
  ☆12Updated 2 years ago
• xia-lab / OptiLCMS
  R package for optimized LC-MS spectra processing
  ☆25Updated last month
• jcapelladesto / geoRge
  geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics
  ☆11Updated 3 years ago