🧬 Unique (& conserved) DNA sequence identification
☆15Mar 10, 2026Updated last week
Alternatives and similar repositories for unikseq
Users that are interested in unikseq are comparing it to the libraries listed below
Sorting:
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization☆24Mar 10, 2026Updated last week
- Multiplex PCR design, in silico☆19Mar 4, 2025Updated last year
- ☆15May 1, 2025Updated 10 months ago
- Rapidly extract reads from a FASTQ file based on taxonomic classification via Kraken2.☆13Jan 26, 2026Updated last month
- mgikit is a collection of tools used to demultiplex fastq files and generate demultiplexing and quality reports.☆18Feb 26, 2026Updated 3 weeks ago
- mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification☆13Oct 9, 2025Updated 5 months ago
- Quickly get coverage statistics given reads and an assembly☆16May 13, 2024Updated last year
- A repository for my work on rCRUX☆12Jun 21, 2024Updated last year
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- Chimera: A Versatile Metagenomic Classification Tool☆21Feb 1, 2026Updated last month
- Searching DNA/RNA sequence databases with PCR and/or probe queries☆22Feb 23, 2026Updated 3 weeks ago
- A easy-to-use Python API for Primer3 primer design.☆16Nov 10, 2022Updated 3 years ago
- Physalia course Machine Learning for Multi-Omics Integration☆19Jun 11, 2025Updated 9 months ago
- A functional profiler for metagenomes using FracMinHash☆21Jul 14, 2025Updated 8 months ago
- finding conserved regions in highly diverse genomes☆16Jun 1, 2025Updated 9 months ago
- Group resources and operating procedures☆14Dec 17, 2025Updated 3 months ago
- ☆29Mar 5, 2026Updated 2 weeks ago
- ☆11Jun 29, 2021Updated 4 years ago
- Sequence Taxonomic Assignment by Massive Pairwise Alignments☆14Jun 27, 2023Updated 2 years ago
- software to identify primers that can distinguish genomes☆20Jan 23, 2026Updated last month
- Delve deeper into using R and vegan to analyse complex multivariate community ecology data with this free webinar☆21Jul 9, 2020Updated 5 years ago
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆28Feb 12, 2026Updated last month
- The material in this repository is about implementing the Normalizing Flows for single-cell data.☆22Jan 6, 2021Updated 5 years ago
- Scripts for analyzing Illumina-generated environmental DNA sequence data.☆20Feb 22, 2018Updated 8 years ago
- Compare different genome alignment tools using a wide range of genomes with different complexities.☆14Dec 3, 2022Updated 3 years ago
- PrimerTree: Visually Assessing the Specificity and Informativeness of Primer Pairs☆52Oct 28, 2025Updated 4 months ago
- LoD calculator☆24Jul 11, 2019Updated 6 years ago
- A GPU-accelerated method for ultrarapid pathogen identification from metagenomic sequences.☆29Jun 4, 2024Updated last year
- Niche modelling with biomod2 using 70 environmental variables summarized in PCA Axes☆19Apr 28, 2020Updated 5 years ago
- Overview of our data for microbial genomic benchmarking☆35Feb 5, 2026Updated last month
- Modular & interactive analysis components for bioinformatics☆18Dec 9, 2025Updated 3 months ago
- Snakemake pipeline calculating KEGG orthologue abundance in metagenomic sequence data.☆26Feb 14, 2026Updated last month
- Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionfor…☆27Jan 7, 2025Updated last year
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Jan 5, 2026Updated 2 months ago
- Nextflow pipeline for BWA, BWA2 and STAR alignments☆12Jul 22, 2024Updated last year
- Short idioms and patterns for transforming, merging and managing files and channels in Nextflow.☆17Jul 27, 2025Updated 7 months ago
- Clonal reconstruction from HTS data☆10Oct 27, 2021Updated 4 years ago
- Fast, accurate taxonomic assignments for the human vaginal microbiota☆11Feb 11, 2026Updated last month
- polysat 1.7: tools for polyploid microsatellite analysis☆12Dec 20, 2024Updated last year