RemiAllio / MitoFinderLinks
MitoFinder: efficient automated large-scale extraction of mitogenomic data from high throughput sequencing data
☆109Updated last year
Alternatives and similar repositories for MitoFinder
Users that are interested in MitoFinder are comparing it to the libraries listed below
Sorting:
- TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes☆99Updated 6 months ago
- Version 5 of the CAFE phylogenetics software☆142Updated 6 months ago
- Few scripts facilitating the extraction of info from Repeat Masker .out files☆81Updated 4 years ago
- Reference-free profiling of polyploid genomes☆121Updated 2 months ago
- source code for EVM☆116Updated 8 months ago
- Foreign Contamination Screening caller scripts and documentation☆134Updated 5 months ago
- NLR-Annotator upload☆71Updated 2 years ago
- A pipeline used to identify different modes of duplicated gene pairs☆106Updated last month
- MitoZ: A toolkit for assembly, annotation, and visualization of animal mitochondrial genomes☆127Updated 9 months ago
- Interactive quality assessment of genome assemblies☆105Updated 3 months ago
- BUSCO Phylogenomics | Utility script to construct species phylogenies using BUSCO proteins☆76Updated 10 months ago
- Constructing a pangenome gene graph☆195Updated 2 weeks ago
- SynVisio is an interactive multiscale visualization tool that lets you explore the results of McScanX a popular synteny and collinearity …☆88Updated last year
- Find, circularise and annotate mitogenome from PacBio assemblies☆186Updated 3 months ago
- Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data☆116Updated 2 years ago
- Structural Variant Identification Method using Genome Assemblies☆122Updated 2 years ago
- ☆137Updated 3 months ago
- Get assembly statistics from FASTA and FASTQ files☆122Updated 2 years ago
- ☆82Updated last year
- Development version of Easyfig☆100Updated last year
- List of genome assembly tools☆72Updated 3 weeks ago
- This is the standalone version of the EviAnn pipeline☆113Updated last week
- Synteny Imager☆64Updated last month
- Algorithm For Gene Order Reconstruction in Ancestors☆77Updated last week
- Dfam Transposable Element Tools Docker container.☆100Updated last week
- ☆78Updated 4 years ago
- GCE (genomic charactor estimator) is a bayes model based method to estimate the genome size, genomic repeat content and the heterozygsis…☆53Updated 5 years ago
- Make colorful identity heatmaps of genomic sequence☆120Updated last year
- Neural network classification of TE☆92Updated 2 months ago
- A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulatio…☆112Updated 2 months ago