A repository for my work on rCRUX
☆12Jun 21, 2024Updated last year
Alternatives and similar repositories for rCRUX
Users that are interested in rCRUX are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆15Mar 16, 2026Updated last week
- R package for downstream analysis for anacapa eDNA pipeline☆23Dec 10, 2021Updated 4 years ago
- The ncrmp.benthic.analysis package is designed to use benthic coral reef data collected from the Atlantic regions of NOAA's National Cora…☆11Mar 20, 2026Updated last week
- 🧬 Unique (& conserved) DNA sequence identification☆17Mar 10, 2026Updated 2 weeks ago
- mytax is a tool for building custom taxonomies, useful for nucleotide sequence classification☆13Oct 9, 2025Updated 5 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Shiny Dashboard☆14Nov 3, 2023Updated 2 years ago
- creating reference databases for amplicon sequencing☆49Jan 13, 2026Updated 2 months ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 6 years ago
- Getting Started with Shiny for R - posit::conf 2023☆16Sep 18, 2023Updated 2 years ago
- metabaR is an R package to curate and visualise DNA metabarcoding data after basic bioinformatics analyses.☆17Jul 31, 2025Updated 7 months ago
- Resources and issue tracker for the NMFS posit connect instance.☆13May 30, 2025Updated 9 months ago
- R package MiscMetabar: Miscellaneous functions for metabarcoding analysis☆21Updated this week
- Group resources and operating procedures☆14Dec 17, 2025Updated 3 months ago
- mtGrasp: de novo reference-grade mitochondrial genome assembly and standardization☆24Updated this week
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- R library to access species interaction data of http://globalbioticinteractions.org☆18Feb 2, 2026Updated last month
- accessory functions for processing microbial community data☆12Dec 24, 2022Updated 3 years ago
- Advanced Pipeline for Simple yet Comprehensive AnaLysEs of DNA metabarcoding data☆19Jan 27, 2026Updated 2 months ago
- Multinomial Logistic-Normal Models (really fast)☆20Feb 26, 2025Updated last year
- Snakemake workflow to map and quantify microbial genomes in metagenomic reads☆13Oct 10, 2025Updated 5 months ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆11Mar 11, 2020Updated 6 years ago
- Assessing the quality of prokaryotic genomes, filtering and dereplication☆11Aug 26, 2022Updated 3 years ago
- A series of perl and python scripts for generating genotypes from NGS fastq files from GTseq library sequencing.☆21Jun 14, 2022Updated 3 years ago
- Scripts for analyzing Illumina-generated environmental DNA sequence data.☆20Feb 22, 2018Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- my resume built in R with pagedown::html_resume☆10Jun 14, 2024Updated last year
- mGEMS Genomic epidemiology with mixed samples☆15Sep 4, 2024Updated last year
- Functions to manipulate and visualize microbial community data☆14Mar 20, 2026Updated last week
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Feb 25, 2023Updated 3 years ago
- Functions to manipulate and visualize microbial community data☆12Sep 15, 2023Updated 2 years ago
- Weakly-Supervised Cell Tracking via Backward-and-Forward Propagation, in ECCV 2020☆11Aug 4, 2020Updated 5 years ago
- This is a repository for draft versions of a book called Meta-Analysis of Ecological Data in R (MaEDR)☆12Jul 28, 2022Updated 3 years ago
- A versatile method for systematic identification of differential RNA splicing across platforms☆16Mar 21, 2026Updated last week
- Dadaist2 🟨 Highway to R☆13Mar 7, 2025Updated last year
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- TaxonTableTools - A comprehensive, platform-independent graphical user interface software to explore and visualise DNA metabarcoding data☆24Jul 15, 2025Updated 8 months ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Oct 13, 2025Updated 5 months ago
- A modular, containerized pipeline for PRO-seq data processing☆11Mar 6, 2026Updated 3 weeks ago
- Basestack is a platform for rapid and real time analysis of NGS data. It provides a executable application that connects standard bionfor…☆27Jan 7, 2025Updated last year
- strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.☆26Jan 5, 2026Updated 2 months ago
- Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787☆10May 10, 2021Updated 4 years ago
- Makes distinct TSS of each gene from a Gencode annotation☆10Oct 19, 2016Updated 9 years ago