BioOmics / iSeqLinks
Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
☆232Updated last month
Alternatives and similar repositories for iSeq
Users that are interested in iSeq are comparing it to the libraries listed below
Sorting:
- Step-by-step analysis pipeline for RNA-seq data☆161Updated 2 years ago
- Discovering known and novel miRNAs from small RNA sequencing data☆158Updated last month
- ☆286Updated 2 months ago
- A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysi…☆141Updated 7 months ago
- Tool for plotting sequencing data along genomic coordinates.☆335Updated last month
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆178Updated last month
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆223Updated this week
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆251Updated this week
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆288Updated 5 months ago
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆201Updated 5 years ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆229Updated 6 months ago
- parallel fastq-dump wrapper☆302Updated 2 years ago
- Download FASTQ files from SRA or ENA repositories.☆363Updated last week
- Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)☆199Updated this week
- ☆102Updated 3 months ago
- ATAC-seq peak-calling and QC analysis pipeline☆221Updated last month
- A package for including transposable elements in differential enrichment analysis of sequencing datasets.☆275Updated 2 months ago
- SUPPA: Fast quantification of splicing and differential splicing☆292Updated 2 months ago
- ☆157Updated 3 years ago
- A short tutorial on how to use RSEM☆139Updated 5 years ago
- ☆157Updated 7 months ago
- AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …☆157Updated last year
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆107Updated 7 months ago
- Metagenomic sequence data analysis pipeline☆34Updated 4 months ago
- Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark/bwa-meth + MethylDackel or bwa-mem + rastair☆185Updated last week
- Fast alignment and preprocessing of chromatin profiles☆209Updated last week
- ChIP-seq peak-calling, QC and differential analysis pipeline.☆229Updated last month
- Check strandedness of RNA-Seq fastq files☆128Updated 3 years ago
- Fast and accurate gene fusion detection from RNA-Seq data☆258Updated 3 months ago
- HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.☆263Updated 6 months ago