Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
☆260Oct 15, 2026Updated 2 weeks ago
Alternatives and similar repositories for iSeq
Users that are interested in iSeq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Download FASTQ files from SRA or ENA repositories.☆410Oct 26, 2026Updated last week
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆319Sep 2, 2026Updated 2 months ago
- An efficient CLI to extract sequences from the SRA☆132Jun 12, 2026Updated 4 months ago
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆227Updated this week
- Bioinformatics tool for Locus Visualisation☆176Mar 30, 2026Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Whole Genome Alignment Tools☆225Nov 6, 2025Updated 11 months ago
- Aligns short reads using dynamic seed size with strobemers☆211Updated this week
- Precise host read removal☆134Apr 13, 2026Updated 6 months ago
- Genome browser and variant annotation☆400Updated this week
- parallel fastq-dump wrapper☆311Apr 26, 2023Updated 3 years ago
- ☆21Feb 15, 2025Updated last year
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆332Oct 10, 2026Updated 3 weeks ago
- Using Deep Learning to predict gene annotations☆315Oct 27, 2026Updated last week
- Another Gtf/Gff Analysis Toolkit https://nbisweden.github.io/AGAT/☆589Sep 7, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.☆38Jul 21, 2025Updated last year
- Red: an intelligent, rapid, accurate tool for detecting repeats de-novo on the genomic scale.☆21Apr 24, 2024Updated 2 years ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆47Dec 18, 2025Updated 10 months ago
- 🏔 coverage extraction from BAM/CRAM files, supporting targets 📊☆67Oct 14, 2026Updated 2 weeks ago
- Package for fetching metadata and downloading data from SRA/ENA/GEO☆369Aug 16, 2026Updated 2 months ago
- GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more☆505Jul 7, 2026Updated 3 months ago
- Tiberius is a deep learning gene finder.☆145Updated this week
- A genome visualization python package for comparative genomics☆427Jun 14, 2026Updated 4 months ago
- Successor of bwa-mem for short-read alignment☆359Updated this week
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Align proteins to genomes with splicing and frameshift☆425Jan 5, 2026Updated 9 months ago
- Fast DNA search and [host] depletion using minimizers☆128Oct 26, 2026Updated last week
- SplitsTree App☆134Oct 22, 2026Updated last week
- A bioinformatics tool written in Rust to find palindromic sequences in DNA☆39Feb 20, 2026Updated 8 months ago
- A grammar of graphics for comparative genomics☆792Oct 5, 2026Updated 3 weeks ago
- The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.☆53Feb 8, 2026Updated 8 months ago
- Mumemto: multi-MUM and MEM finding across pangenomes☆140Sep 21, 2026Updated last month
- Microbial Genome Circular plotting tool for comparative genomics using Circos☆38Feb 1, 2023Updated 3 years ago
- Metax: Accurate Cross-Domain Taxon Profiling via a Probabilistic Model of Genome Coverage☆39Oct 12, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- FastOMA is a scalable software package to infer orthology relationship.☆104Oct 26, 2026Updated last week
- Correcting errors in noisy long reads using variation graphs☆53Nov 17, 2022Updated 3 years ago
- Tools for fast and flexible genome assembly scaffolding and improvement☆578Oct 1, 2026Updated last month
- Creating alignment plots from bam files☆137Updated this week
- the pangenome graph builder☆522Jul 24, 2026Updated 3 months ago
- a python package for fast random access to sequences from plain and gzipped FASTA/Q files☆296Jun 10, 2026Updated 4 months ago
- High-precision TE Annotator☆168Dec 4, 2025Updated 10 months ago