BioOmics / iSeqLinks
Download sequencing data and metadata from GSA, SRA, ENA, and DDBJ databases.
☆202Updated 3 weeks ago
Alternatives and similar repositories for iSeq
Users that are interested in iSeq are comparing it to the libraries listed below
Sorting:
- Step-by-step analysis pipeline for RNA-seq data☆130Updated last year
- Discovering known and novel miRNAs from small RNA sequencing data☆151Updated 10 months ago
- Tool for plotting sequencing data along genomic coordinates.☆296Updated 2 weeks ago
- Reference-guided transcript discovery and quantification for long read RNA-Seq data☆212Updated 2 weeks ago
- HTSeq is a Python library to facilitate processing and analysis of data from high-throughput sequencing (HTS) experiments.☆102Updated last month
- Tool for the Quality Control of Long-Read Defined Transcriptomes☆231Updated last week
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆163Updated last month
- A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysi…☆134Updated last month
- 🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.☆177Updated 4 years ago
- Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.☆273Updated last month
- ☆263Updated 7 months ago
- ☆94Updated 2 months ago
- Check strandedness of RNA-Seq fastq files☆124Updated 2 years ago
- Metagenomic sequence data analysis pipeline☆33Updated last month
- HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.☆251Updated 3 weeks ago
- ATAC-seq peak-calling and QC analysis pipeline☆206Updated last week
- AmpliconArchitect (AA) is a tool to identify one or more connected genomic regions which have simultaneous copy number amplification and …☆147Updated last year
- Generate IGV style locus tracks from bigWig files in R☆164Updated 8 months ago
- Analysis pipeline for ATAC-seq data☆63Updated last year
- Download FASTQ files from SRA or ENA repositories.☆338Updated 3 weeks ago
- ☆147Updated last month
- Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workf…☆163Updated 2 months ago
- ☆152Updated 2 years ago
- Fast and accurate gene fusion detection from RNA-Seq data☆244Updated 3 months ago
- A short tutorial on how to use RSEM☆137Updated 5 years ago
- release version☆54Updated 2 years ago
- Iso-Seq - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads☆215Updated last week
- Detection of m6A from direct RNA-Seq data☆124Updated last month
- ☆138Updated 6 years ago
- Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal☆216Updated 2 weeks ago