Bioinformatics tool for Locus Visualisation
☆176Mar 30, 2026Updated 7 months ago
Alternatives and similar repositories for lovis4u
Users that are interested in lovis4u are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A tool for generating consensus long-read assemblies for bacterial genomes☆246Oct 8, 2026Updated 3 weeks ago
- geNomad: Identification of mobile genetic elements☆342Oct 14, 2026Updated 3 weeks ago
- LexicMap: efficient sequence alignment against millions of prokaryotic genomes☆227Updated this week
- ☆39Updated this week
- A genome visualization python package for comparative genomics☆428Jun 14, 2026Updated 4 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An R package designed for drawing gene arrow maps☆102Updated this week
- Gene cluster comparison figure generator☆662Updated this week
- Bifrost graph gene caller.☆102Aug 31, 2026Updated 2 months ago
- Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.☆159Updated this week
- Assort phage protein sequences into phamilies using MMseqs2☆12Dec 16, 2024Updated last year
- Follow up to Grace Blackwell's 661k dataset, for 2023☆157Jun 10, 2026Updated 4 months ago
- Phage Annotation using Protein Structures☆180Updated this week
- BEAV: Bacterial Element Annotation reVamped☆78Aug 21, 2025Updated last year
- Mumemto: multi-MUM and MEM finding across pangenomes☆140Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A comprehensive prokaryotic genome annotation pipeline☆93Oct 12, 2026Updated 3 weeks ago
- Pharokka is a rapid standardised annotation tool for bacteriophage genomes and metagenomes.☆239Oct 21, 2026Updated 2 weeks ago
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆190Mar 17, 2026Updated 7 months ago
- A rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller.☆34Oct 14, 2026Updated 3 weeks ago
- A genome diagram generator for microbes and organelles☆163Updated this week
- a tool to filter sites in a FASTA-format whole-genome pseudo-alignment☆67Jun 16, 2025Updated last year
- Synteny and Rearrangement Identifier☆498Jul 1, 2026Updated 4 months ago
- AMR/VF LGT focused bacterial genomics analysis workflow☆29Feb 19, 2026Updated 8 months ago
- Genome size estimation from long read overlaps☆98Sep 8, 2026Updated last month
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Assembling phage particles one protein at a time☆27Aug 3, 2026Updated 3 months ago
- Find clustered hits from a BLAST search☆153Aug 6, 2026Updated 3 months ago
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆333Oct 10, 2026Updated 3 weeks ago
- A high-resolution long-read metagenome assembler for even noisy reads. Myloasm assembles strain-resolved, circular + complete genomes fro…☆176Oct 11, 2026Updated 3 weeks ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆692Oct 11, 2026Updated 3 weeks ago
- Plasmid analysis using rearrangement distances☆56Oct 30, 2026Updated last week
- A methodology to rapidly leverage whole genome sequencing of bacterial isolates for clinical identification.☆36Oct 6, 2026Updated 3 weeks ago
- Detecting multi-genome synteny using minimizer graph mapping☆117Sep 28, 2026Updated last month
- MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.☆239May 9, 2026Updated 5 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Graph-based assembly phasing☆102Nov 25, 2025Updated 11 months ago
- Simple-to-use interactive comparison of two bacterial genomes☆28Jan 30, 2026Updated 9 months ago
- Remove human reads from a sequencing run☆54Jun 29, 2026Updated 4 months ago
- Discovery of conserved gene clusters in multiple genomes☆136Oct 22, 2026Updated 2 weeks ago
- Fast average nucleotide identity (ANI) calculator for bacterial genomes, MAGs, and contigs. Supports genome comparisons and large-scale d…☆271Oct 14, 2026Updated 3 weeks ago
- This repository contains the `a-liner` script and sample data.☆28Aug 6, 2026Updated 3 months ago
- A grammar of graphics for comparative genomics☆791Oct 5, 2026Updated last month