☆16Dec 26, 2022Updated 3 years ago
Alternatives and similar repositories for MMinte
Users that are interested in MMinte are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A collection of M models downloaded from published studies☆16Feb 18, 2016Updated 10 years ago
- ☆12Apr 6, 2021Updated 4 years ago
- Model-based Integration of Metabolite Observations and Species Abundances☆24Feb 21, 2020Updated 6 years ago
- ☆10Feb 3, 2022Updated 4 years ago
- Microbiota Analysis in R Easily☆12Jul 14, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Python package for building and analyzing models using ModelSEED☆26Feb 11, 2026Updated last month
- JBEI Quantitative Metabolic Modeling library☆13Feb 7, 2020Updated 6 years ago
- Pathway-based and phylogenetically adjusted quantification of competition and cooperation between microbial species☆18Mar 17, 2021Updated 5 years ago
- A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.☆21Jul 22, 2023Updated 2 years ago
- Open-source Python package for a wide range of tasks in modeling cardiac electrophysiology using finite-difference methods.☆12Updated this week
- full taxonomer cython repository☆22Dec 1, 2019Updated 6 years ago
- Extremely accurate algorithm used to group DNA sequences from microbial communities into operational taxonomic units (proxy for species) …☆14Nov 20, 2018Updated 7 years ago
- Plot microbiome time series in parallel☆27Nov 7, 2023Updated 2 years ago
- dada2 formatted nifH database☆13May 17, 2024Updated last year
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A list of (detailed, non-stochastic) action potential models, with links to papers, source code, CellML and Myokit implementations☆12Mar 16, 2026Updated last week
- ☆23Aug 28, 2020Updated 5 years ago
- ☆22Dec 7, 2023Updated 2 years ago
- The full package for the "multi-scale cardiac simulation framework" in C/C++☆12Feb 1, 2024Updated 2 years ago
- ☆22Apr 3, 2023Updated 2 years ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Sep 22, 2020Updated 5 years ago
- A method for identifying deleterious protein variation.☆11Nov 14, 2016Updated 9 years ago
- Fast alignment-free pangenome creation and exploration☆28Apr 16, 2020Updated 5 years ago
- Desirability Functions for Multiparameter Optimization☆14Nov 14, 2025Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- From annotated genomes to metabolic screening in large scale microbiotas☆69Jan 16, 2026Updated 2 months ago
- The Cardiovascular Integrated Modelling and Simulation Environment's Open-Source Incompressibe Navier Stokes Finite Element Flowsolver☆13Jan 23, 2022Updated 4 years ago
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Mar 9, 2021Updated 5 years ago
- Train word2vec on Pubmed data, compare 2 GO terms, compare 2 genes.☆12Apr 7, 2017Updated 8 years ago
- Collection of commonly used RDP Tools for easy building☆51Jun 8, 2023Updated 2 years ago
- Mackinac: A bridge between ModelSEED and COBRApy☆19Aug 20, 2018Updated 7 years ago
- A Python MPI Pool☆17Jun 21, 2020Updated 5 years ago
- R package for computing alpha and beta contributional diversity metrics☆11May 5, 2023Updated 2 years ago
- A server for maintaining high-throughput sequencing QC data☆13Aug 5, 2025Updated 7 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- Cytoscape plugin for neo4j☆21Aug 15, 2025Updated 7 months ago
- Digital Database of Microbial Phenotypes. Like an online Bergey's Manual.☆13Mar 1, 2012Updated 14 years ago
- ☆17Dec 5, 2017Updated 8 years ago
- An open-source python library for the processing of fluorescence video data☆17Jul 5, 2025Updated 8 months ago
- Automated synthetic microbial Community Design☆13Mar 26, 2021Updated 5 years ago
- EMIRGE reconstructs full length ribosomal genes from short read sequencing data.☆38Sep 15, 2023Updated 2 years ago
- A phylogenetic profile analysis tool☆38Mar 11, 2026Updated 2 weeks ago