mendessoares / MMinteLinks
☆16Updated 2 years ago
Alternatives and similar repositories for MMinte
Users that are interested in MMinte are comparing it to the libraries listed below
Sorting:
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Updated 4 years ago
- ☆17Updated last year
- OPAL: Open-community Profiling Assessment tooL☆30Updated 11 months ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆24Updated 4 months ago
- The genome annotation service provides automated gene annotation based on the RAST system. This deploys both client and service component…☆11Updated 5 years ago
- raw data from tax-credit project☆14Updated 6 years ago
- Utility program for extracting sequences from a fasta/fastq file☆35Updated 11 months ago
- Tutorial for bacterial GWAS pipline and bugwas, created for Bodega Bay 2016 NGS workshop☆18Updated 9 years ago
- Repository of the integrated mouse gut metagenomic catalog☆20Updated 3 years ago
- ☆43Updated last year
- Compute strain abundance in a defined microbial community☆10Updated 2 years ago
- A containerized bioinformatics pipeline for viral metagenomic data analysis☆37Updated last year
- Analysing Metagenomic Species (MGS)☆42Updated 5 years ago
- Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation☆31Updated 4 years ago
- SHOOT.bio - the phylogenetic search engine☆27Updated 2 years ago
- An RNA virus strain-level identification tool for short reads.☆22Updated last year
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆23Updated last year
- Profiler for metagenomics based on NGLess☆13Updated last year
- ShortBRED is a pipeline to take a set of protein sequences, reduce them to a set of unique identifying strings ("markers"), and then sear…☆31Updated 10 months ago
- Convert genbank files to a swath of other formats☆24Updated 2 years ago
- Trimming tool for Oxford Nanopore sequence data☆22Updated 4 years ago
- simple and not slow ORF caller☆21Updated last month
- annotation pipeline for microbial genomes and metagenomes☆18Updated 7 years ago
- Metagenomic Intra-Species Diversity Analysis (MIDAS)☆40Updated last year
- Sample Metadata Curation for curatedMetagenomicData☆29Updated 2 weeks ago
- PARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied ann…☆25Updated 2 years ago
- Metagenomic species profiling with enhanced coverage of the human gut microbiome☆25Updated last year
- viralComplete: BLAST-based viral completeness verification☆24Updated 4 years ago
- ☆23Updated 6 years ago
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated 2 years ago