BIONF / fDOGLinks
Feature-aware Directed OrtholoG search
☆13Updated last month
Alternatives and similar repositories for fDOG
Users that are interested in fDOG are comparing it to the libraries listed below
Sorting:
- Improved Inference of Ortholog Groups using Hidden Markov Models☆37Updated 2 months ago
- Combining de novo and reference-guided assembly with Scaffold_builder☆20Updated 4 years ago
- ☆19Updated 3 years ago
- a python package for automated generation of phylogenetic trees from genbank files☆23Updated last week
- ☆22Updated 2 years ago
- Phyling: phylogenetic inference from annotated genomes☆27Updated 3 weeks ago
- A workflow and scripts for large-scale antiSMASH analyses☆46Updated 7 months ago
- Core ELEment Bias Removal In Metagenome Binned ORthologs: A pipeline to make pangenomes from MAGs☆25Updated last year
- ☆42Updated last year
- rapid phylogenomic tree calculator - A highly customizable framework for reproducible phylogenomic inference☆27Updated last week
- ☆14Updated 6 months ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆32Updated last year
- Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)☆49Updated 10 months ago
- ☆31Updated 4 years ago
- Pipeline for major biological analyses.☆35Updated 3 years ago
- Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.☆23Updated last month
- ☆45Updated 2 years ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆38Updated last month
- Comparison pipeline for Prokaryote Protein Coding Gene Predictors☆26Updated last week
- Rapid and simple taxonomic profiling of genome and metagenome contigs☆29Updated 2 years ago
- Gene tree - species tree reconciliation from gene tree distributions☆35Updated 3 weeks ago
- A selection of short scripts for analyzing microbial genomes☆14Updated 7 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated 2 years ago
- Remove contaminated contigs from genomes using k-mers and taxonomies.☆59Updated 2 years ago
- ☆16Updated 4 months ago
- SMBGC Annotation using Neural Networks Trained on Interpro Signatures☆29Updated 7 months ago
- CLI tool for finding gene clusters in many genomes and placing them in discrete groups based on gene content similarity.☆19Updated last year
- HMmer Based UndeRstandinG of gene clustERs☆15Updated 5 months ago
- ☆28Updated 9 months ago
- UFCG: Universal Fungal Core Genes☆34Updated 3 months ago