mentatpsi / KEGG-Crawler
A parallel API crawler for the retrieval of Kyoto Encyclopedia of Genes and Genomes metabolic and genomics data.
☆20Updated last year
Alternatives and similar repositories for KEGG-Crawler:
Users that are interested in KEGG-Crawler are comparing it to the libraries listed below
- Docker image of JBrowse Genome Browser☆15Updated 3 years ago
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆31Updated 2 years ago
- A manually curated database of human gut metabolic modules.☆18Updated 6 years ago
- PanGenomePipeline☆15Updated 11 months ago
- NastyBugs: a simple method for extracting antimicrobial resistance information from metagenomes☆20Updated 6 years ago
- GOMCL: a toolkit to cluster, evaluate, and extract non-redundant associations of Gene Ontology-based functions☆20Updated last year
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 3 years ago
- Open source short linear motif discovery and sequence analysis☆23Updated 6 months ago
- pathway based data integration and visualization☆40Updated 11 months ago
- Mutation tracker for microbial genomes☆15Updated 4 years ago
- A Bio2BEL package for integrating pathway-related information from KEGG in BEL☆13Updated 3 years ago
- iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline☆13Updated 10 months ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆11Updated 4 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆32Updated 9 months ago
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Updated last year
- Quickly find and score consensus between metabolite identifications and gene annotations☆17Updated 3 months ago
- Inference of putative transmission phylogenetic clusters☆11Updated 4 years ago
- A set of command line tools based on R and JavaScript.☆18Updated 4 years ago
- ☆21Updated 8 years ago
- A very simple BLAST filtering pipeline☆18Updated 10 years ago
- ☆19Updated last year
- ☆30Updated 4 years ago
- programs and scripts, mainly python, for analyses related to nucleic or protein sequences☆24Updated 3 weeks ago
- A guide to running MaxQuant in Linux☆32Updated 5 years ago
- MicrobeDirectory 2.0☆22Updated 4 years ago
- Network annotation visualization☆17Updated 2 years ago
- ☆23Updated 4 years ago
- An interactive learning resource for next-generation sequencing (NGS) techniques☆28Updated 6 years ago
- Tools for next-generation sequencing analysis☆88Updated 5 years ago
- A web-based "serverless" viewer of QIIME 2 Artifacts and Visualizations☆14Updated last year