zpliulab / GENELink
☆26Updated 2 years ago
Alternatives and similar repositories for GENELink:
Users that are interested in GENELink are comparing it to the libraries listed below
- ☆29Updated last year
- ☆72Updated last year
- Cell clustering for spatial transcriptomics data with graph neural network☆59Updated last year
- Single-cell biological network inference using a heterogeneous graph transformer☆70Updated last year
- A VGAE-based model to infer transcription factor regulatory network☆24Updated 2 years ago
- A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.☆49Updated 3 years ago
- scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics☆41Updated 2 years ago
- Deep learning model for single-cell inference of multi-omic profiles from a single input modality.☆39Updated last year
- Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence☆37Updated 2 years ago
- ☆17Updated 4 months ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆24Updated last year
- ☆37Updated 2 years ago
- Cell-type Annotation for Single-cell Transcriptomics using Deep Learning with a Weighted Graph Neural Network☆102Updated last year
- overview of spatial datasets☆70Updated last year
- Imputing Single-cell RNA-seq data by combining Graph Convolution and Autoencoder Neural Networks☆19Updated 8 months ago
- using graph convolutional neural network and spaital transcriptomics data to infer cell-cell interactions☆56Updated 3 years ago
- Single cell joint embedding and modality prediction with autoencoder☆9Updated 2 years ago
- The source code and results for different methods on annotating external testing datsets of human and mouse.☆12Updated 3 years ago
- repository containing analysis scripts and auxiliary files☆33Updated 4 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆58Updated 4 months ago
- covolutional neural network based coexpression analysis☆76Updated 4 years ago
- ☆17Updated 3 years ago
- Multi-omics integration method using AE and GCN☆33Updated last year
- "Topological Identification and Interpretation for Single-cell Gene Regulation Elucidation across Multiple Platforms using scMGCA" in Nat…☆14Updated 2 years ago
- ☆45Updated 2 years ago
- Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets☆30Updated last year
- spatial transcriptome, single cell☆67Updated last year
- an integrative algorithm to distinguish spatially variable cell subclusters by reconstructing cells onto a pseudo space with spatial tran…☆22Updated last year
- Additional code and analysis from the single-cell integration benchmarking project☆57Updated 2 years ago
- Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics☆43Updated last year