☆40Aug 1, 2026Updated 2 months ago
Alternatives and similar repositories for GENELink
Users that are interested in GENELink are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆89Jun 24, 2023Updated 3 years ago
- A deep model infers gene regulation networks from scRNA-seq data.☆13Sep 3, 2026Updated last month
- A VGAE-based model to infer transcription factor regulatory network☆29Jul 25, 2022Updated 4 years ago
- ☆30Apr 11, 2023Updated 3 years ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- BEELINE: evaluation of algorithms for gene regulatory network inference☆219Jul 11, 2026Updated 3 months ago
- ☆142Updated this week
- Pseudotime analysis for time-series single-cell sequencing and imaging data☆14Mar 13, 2026Updated 7 months ago
- Python package for CS-CORE, a statistical method for cell-type-specific co-expression inference from single cell RNA-sequencing data☆15Dec 11, 2023Updated 2 years ago
- Implementation of entropy of mixing algorithm in python☆10Oct 19, 2022Updated 4 years ago
- Code for the paper GCLink: a graph contrastive link prediction framework for gene regulatory network inference☆14Jun 21, 2026Updated 4 months ago
- R package for single-cell comparative regulatory analysis☆13Jun 26, 2021Updated 5 years ago
- SIMBA: SIngle-cell eMBedding Along with features☆67Oct 16, 2024Updated 2 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆46Sep 20, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆32Aug 8, 2023Updated 3 years ago
- ☆15Nov 5, 2025Updated 11 months ago
- SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression pro…☆15Oct 16, 2017Updated 9 years ago
- ☆22Jun 12, 2026Updated 4 months ago
- Supervised reconstruction of causal gene-regulatory networks☆10Sep 9, 2025Updated last year
- Task-based gene regulatory network inference using single-cell or bulk gene expression data conditioned on a prior network.☆56Jun 9, 2026Updated 4 months ago
- Analysis code for the TAP-seq manuscript.☆13Jun 25, 2021Updated 5 years ago
- An unsupervised scRNA-seq analysis workflow with graph attention networks☆25May 14, 2023Updated 3 years ago
- MOJITOO: a fast and universal method for integration of multimodal single cell data☆13Oct 23, 2024Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Deep learning for single-cell Gene Regulatory Networks☆15Oct 13, 2026Updated 2 weeks ago
- Vector representations of gene co-expression in single cell RNAseq.☆37Jun 7, 2026Updated 4 months ago
- R package for integrating and comparing multiple single cell genomic datasets☆12Dec 27, 2020Updated 5 years ago
- epigenome analysis to rank transcription factors☆15Dec 19, 2019Updated 6 years ago
- Multi-omic velocity inference☆125Oct 23, 2024Updated 2 years ago
- Python package for Single-Cell Euclidean Network Embedding (SCENE): interpretable joint embeddings of cells and genes from single-cell RN…☆20Sep 21, 2026Updated last month
- ☆10Apr 7, 2023Updated 3 years ago
- ☆16Feb 25, 2017Updated 9 years ago
- https://molecular-neurogenetics.github.io/truster/☆12Jul 14, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Code, data and analysis for moslin.☆15Oct 7, 2024Updated 2 years ago
- ☆20May 20, 2021Updated 5 years ago
- ☆15Jul 9, 2025Updated last year
- Scalable sequence-informed embedding of single-cell ATAC-seq data with CellSpace☆42Jan 11, 2025Updated last year
- Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data☆31Oct 24, 2024Updated 2 years ago
- Dissecting the effects of DNA copy number variations on transcriptional programs at single-cell resolution☆14Feb 13, 2026Updated 8 months ago
- ☆12Mar 28, 2023Updated 3 years ago