amsszlh / scMCLinks
R package for integrating and comparing multiple single cell genomic datasets
☆11Updated 5 years ago
Alternatives and similar repositories for scMC
Users that are interested in scMC are comparing it to the libraries listed below
Sorting:
- R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-ce…☆33Updated last month
- Human brain, >200,000 nuclei☆23Updated 4 years ago
- Robust, multivariate, multi-sample, multi-celltype QC for single cell RNA-seq data☆39Updated 3 years ago
- scDataviz: single cell dataviz and downstream analyses☆66Updated 4 years ago
- R package for detection of cell-cell interaction using Non-negative Tensor Decomposition☆34Updated 7 months ago
- Single-cell analysis with non-negative matrix factorization☆46Updated 6 months ago
- ☆43Updated 5 years ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆26Updated 5 years ago
- ConsensusTME Gene Sets and R Script☆39Updated last year
- Normalize CITEseq Data☆67Updated 2 months ago
- R package for specialised analysis of single cell data☆40Updated 3 years ago
- ☆48Updated last year
- An r package that works as a wrapper to homologene☆49Updated 2 years ago
- Toolkit for Single-Cell Velocity☆59Updated 6 months ago
- R package for Bioconductor submission☆38Updated 3 years ago
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆50Updated last week
- Pretty, simple, optionally interactive plots for bioinformatics analysis pipelines☆14Updated 2 years ago
- Calculation of distance metrics for matrices☆26Updated 6 years ago
- An R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database into a Seurat object.☆26Updated 2 years ago
- popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and de…☆23Updated last month
- Nuclear fraction QC metric to detect empty droplets and damaged cells in scRNA-seq data☆41Updated 4 years ago
- ☆31Updated 5 years ago
- R vignettes for processing BUS format single-cell RNA-seq files☆21Updated 5 years ago
- Cell type pipes for R☆52Updated 2 years ago
- A General Framework for Consensus Partitioning☆65Updated 11 months ago
- Code to reproduce TNBC analysis and figures☆25Updated 3 years ago
- R package containing the Cerebro application.☆40Updated 4 years ago
- Clone of the Bioconductor repository for the batchelor package.☆18Updated 10 months ago
- A software package for connecting cell level features in single cell RNA sequencing data with receptor ligand activity. Please be aware t…☆18Updated last year
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 4 years ago