☆12Oct 23, 2023Updated 2 years ago
Alternatives and similar repositories for scDART
Users that are interested in scDART are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- scOpen: single-cell open chromatin analysis via NMF modelling☆28Feb 4, 2023Updated 3 years ago
- ☆18May 30, 2022Updated 4 years ago
- Statistical analysis for spatial omics data☆11Jul 30, 2022Updated 4 years ago
- Variational Auto Encoders for learning binding signatures of transcription factors☆15Mar 14, 2024Updated 2 years ago
- ☆22Jun 17, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq da…☆16May 15, 2023Updated 3 years ago
- Analysis tool for NG-Capture-C, Tri-C and Tiled-C data☆10Jun 10, 2026Updated 4 months ago
- SMILE: Mutual Information Learning for Integration of Single Cell Omics Data☆11Mar 28, 2023Updated 3 years ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 6 years ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆23Sep 17, 2026Updated 3 weeks ago
- Code for spatial subclone paper☆19Jan 23, 2025Updated last year
- Pipeline for analyzing rare mutations in metagenome-assembled genomes☆10Apr 4, 2025Updated last year
- Spatial RNA velocity☆10Oct 3, 2024Updated 2 years ago
- ☆10May 31, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Independent Component Analysis decipher functional modules for better cell clustering and annotation☆18Apr 4, 2022Updated 4 years ago
- Functional Inference of Gene Regulation☆56Jul 5, 2024Updated 2 years ago
- iread☆26Jul 16, 2021Updated 5 years ago
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆28Jul 13, 2026Updated 2 months ago
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 3 years ago
- A deep-learning framework for characterizing and visualizing tissue architecture from spatially resolved transcriptomics☆14Sep 13, 2022Updated 4 years ago
- ☆15May 19, 2022Updated 4 years ago
- Peak calling for 4C data☆13May 4, 2018Updated 8 years ago
- Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.☆11Aug 11, 2026Updated last month
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- functions and algorithms for single cell RNA-seq analyses☆11Jan 26, 2021Updated 5 years ago
- LD Score Regression (LDSC)☆16Dec 16, 2024Updated last year
- Deep learning for modeling gene regulatory network☆23Sep 5, 2021Updated 5 years ago
- Integrated Genome Modeling (IGM): multi-modal data-driven simulator of genome structures☆12Jun 15, 2023Updated 3 years ago
- Bioinformatics pipeline for single-cell 3' UTR isoform quantification☆33Jan 29, 2026Updated 8 months ago
- The million-scale method for single-cell analysis☆10Jul 6, 2023Updated 3 years ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- Transposable element expression at unique loci in single cells with CELLO-seq☆12Jun 17, 2024Updated 2 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14May 7, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Importing vg json graphs to Python data structures.☆12Nov 11, 2020Updated 5 years ago
- Scripts for the analysis of TT-seq and DRB/TT-seq data.☆12Mar 11, 2020Updated 6 years ago
- Dockerised and simplified version of SeqWare-CGP-SomaticCore☆14Mar 5, 2021Updated 5 years ago
- Repository detailing updated allowlisting and clonal analysis workflow☆11Feb 1, 2025Updated last year
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆101Dec 8, 2022Updated 3 years ago
- cross-species analysis of cell identities, markers and regulations☆13Jul 11, 2025Updated last year
- ☆18Sep 6, 2022Updated 4 years ago