Alternatives and similar repositories for STGRNS

Users that are interested in STGRNS are comparing it to the libraries listed below

• OSU-BMBL / deepmaps
  Single-cell biological network inference using a heterogeneous graph transformer
  ☆73Updated 3 months ago
• zpliulab / GENELink
  ☆31Updated 2 years ago
• wukevin / babel
  Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
  ☆42Updated last year
• kodaim1115 / scMM
  ☆17Updated 3 years ago
• xiaoyeye / CCST
  Cell clustering for spatial transcriptomics data with graph neural network
  ☆61Updated 2 years ago
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆30Updated last year
• HantaoShu / DeepSEM
  ☆81Updated last year
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆39Updated 2 years ago
• melobio / Concerto-reproducibility
  ☆38Updated 2 years ago
• theislab / scTab
  ☆58Updated 8 months ago
• theislab / scib-reproducibility
  Additional code and analysis from the single-cell integration benchmarking project
  ☆65Updated 2 years ago
• yhr91 / GEARS_misc
  ☆20Updated 7 months ago
• OSU-BMBL / scDEAL
  Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data
  ☆54Updated 10 months ago
• rsinghlab / scNODE
  scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
  ☆20Updated 7 months ago
• Roy-lab / scMTNI
  ☆26Updated 5 months ago
• WPZgithub / CEFCON
  Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data
  ☆24Updated 7 months ago
• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆26Updated 2 years ago
• Durenlab / LINGER
  ☆106Updated this week
• drieslab / spatial-datasets
  overview of spatial datasets
  ☆75Updated last year
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆40Updated 2 years ago
• yjgeno / GenKI
  ☆15Updated last year
• QuKunLab / SPACEL
  ☆57Updated 10 months ago
• YangLabHKUST / SpatialScope
  A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models
  ☆66Updated last year
• bm2-lab / scMVP
  ☆30Updated last month
• pinellolab / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆61Updated 7 months ago
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• QIFEIDKN / STAGATE
  Adaptive Graph Attention Auto-encoder for Spatial Domain Identification of Spatial Transcriptomics
  ☆45Updated 2 years ago
• zhanglabtools / CAME
  Cell-type Assignment and Module Extraction based on a heterogeneous graph neural network.
  ☆9Updated last year
• huidongchen / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆19Updated last year
• labomics / midas
  ☆54Updated last month