Alternatives and similar repositories for STGRNS

Users that are interested in STGRNS are comparing it to the libraries listed below

• OSU-BMBL / deepmaps
  Single-cell biological network inference using a heterogeneous graph transformer
  ☆73Updated 3 months ago
• zpliulab / GENELink
  ☆33Updated 2 years ago
• melobio / Concerto-reproducibility
  ☆38Updated 2 years ago
• wukevin / babel
  Deep learning model for single-cell inference of multi-omic profiles from a single input modality.
  ☆42Updated last year
• xiaoyeye / CCST
  Cell clustering for spatial transcriptomics data with graph neural network
  ☆62Updated 2 years ago
• QSong-github / scGCN
  scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
  ☆40Updated 2 years ago
• theislab / scib-reproducibility
  Additional code and analysis from the single-cell integration benchmarking project
  ☆67Updated 2 years ago
• drieslab / spatial-datasets
  overview of spatial datasets
  ☆75Updated last year
• yhr91 / GEARS_misc
  ☆20Updated 8 months ago
• Su-informatics-lab / DSTG
  Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
  ☆39Updated 2 years ago
• cliffren / PENCIL
  PENCIL is a novel tool for singlecell data analysis to identify phenotype associated subpopulations and informative genes simultaneously.
  ☆28Updated last year
• YangLabHKUST / Portal
  Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets
  ☆30Updated last year
• labomics / midas
  ☆56Updated last week
• theislab / scTab
  ☆59Updated 9 months ago
• Durenlab / LINGER
  ☆107Updated 3 weeks ago
• Roy-lab / scMTNI
  ☆27Updated last week
• datapplab / AutoClass
  ☆44Updated 3 years ago
• sunyolo / DeepTFni
  A VGAE-based model to infer transcription factor regulatory network
  ☆27Updated 2 years ago
• PeterZZQ / scMoMaT
  ☆21Updated last year
• WPZgithub / CEFCON
  Deciphering driver regulators of cell fate decisions from single-cell RNA-seq data
  ☆24Updated 7 months ago
• pinellolab / simba
  SIMBA: SIngle-cell eMBedding Along with features
  ☆63Updated 8 months ago
• HantaoShu / DeepSEM
  ☆82Updated 2 years ago
• rsinghlab / scNODE
  scNODE: Generative Model for Temporal Single Cell Transcriptomic Data Prediction
  ☆21Updated 8 months ago
• zhoux85 / STAligner
  STAligner is a tool for alignment and integration of spatially resolved transcriptomics data.
  ☆41Updated last year
• QuKunLab / MultiomeBenchmarking
  ☆45Updated 3 months ago
• mcgilldinglab / CellAgentChat
  Python agent-based model tool for inference, visualization and analysis of cell-cell communication from single-cell data
  ☆31Updated 3 months ago
• GuangyuWangLab2021 / cellDancer
  Predict RNA velocity through deep learning
  ☆69Updated last year
• kodaim1115 / scMM
  ☆17Updated 3 years ago
• OSU-BMBL / marsgt
  Multi-omics data analysis for rare population inference using single-cell graph transformer
  ☆19Updated 7 months ago
• hui2000ji / scETM
  A generative topic model that facilitates integrative analysis of large-scale single-cell RNA sequencing data.
  ☆50Updated 3 years ago