argschwind / TAPseq_manuscriptLinks
Analysis code for the TAP-seq manuscript.
☆11Updated 4 years ago
Alternatives and similar repositories for TAPseq_manuscript
Users that are interested in TAPseq_manuscript are comparing it to the libraries listed below
Sorting:
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- ☆28Updated 6 years ago
- <<------ Use SnapATAC!!☆25Updated 6 years ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated last year
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- A clusterability measure for scRNA-seq data.☆18Updated 3 years ago
- Repository for scRNAseq study of human kidneys☆15Updated 6 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Pairwise Hierarchical Model☆19Updated 3 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- scover☆23Updated last year
- ☆41Updated 4 years ago
- Analyzing chromatin accessibility data in R☆18Updated 2 years ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- Marker gene selection from scRNA-seq data☆15Updated 4 years ago
- Single-cell Case Control Analysis☆50Updated 8 months ago
- Mosaic single cell data integration using non-overlapping features☆37Updated 2 years ago
- ☆47Updated last year
- This R package for performing module repertoire analyses and generating fingerprint representations☆16Updated 3 years ago
- Algorithms for single-cell analysis☆29Updated 3 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 6 years ago
- processes GoT amplicon data and generates a table of metrics☆30Updated 3 years ago
- ☆25Updated 4 years ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Updated 2 years ago
- ☆22Updated last year
- binned motif enrichment analysis and visualisation☆40Updated this week
- SIB/Scilifelab autumn school in single cell omics 2019.☆22Updated 5 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 3 months ago