argschwind / TAPseq_manuscriptLinks
Analysis code for the TAP-seq manuscript.
☆11Updated 4 years ago
Alternatives and similar repositories for TAPseq_manuscript
Users that are interested in TAPseq_manuscript are comparing it to the libraries listed below
Sorting:
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆33Updated 5 months ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆21Updated last year
- ☆28Updated 6 years ago
- Snakefile-based process to turn 1.4 million ocular cells into a unified meta-atlas☆26Updated last year
- Evaluation of the effect of quantification choices on RNA velocity estimates☆27Updated 3 years ago
- scover☆23Updated last year
- processes GoT amplicon data and generates a table of metrics☆31Updated 3 years ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆18Updated 3 years ago
- Single-cell Case Control Analysis☆52Updated this week
- <<------ Use SnapATAC!!☆25Updated 6 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Updated 6 years ago
- Regulatory networks with Direct Information☆16Updated 5 years ago
- Supplementary data for Petti, et al 2019 scRNA mutation publication☆16Updated 2 years ago
- Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hi…☆26Updated 3 years ago
- Analysis code for "Perturbation-response genes reveal signaling footprints in cancer gene expression"☆20Updated 7 years ago
- Negative binomial regression for Spatial Transcriptomics data as described in Maaskola et al. 2018☆22Updated 6 years ago
- Exon-Intron Split Analysis (EISA) in R☆16Updated 4 months ago
- Bead-based single-cell atac processing☆33Updated 3 years ago
- ☆36Updated last year
- Allele-Specific Expression by Single-Cell RNA Sequencing☆29Updated 4 years ago
- Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile☆20Updated last year
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- ☆42Updated 4 years ago
- ☆12Updated 6 years ago
- Single-cell Scalable Visualization and Analytics☆26Updated 6 years ago
- Data and code for the paper "Developmental diversification of cortical inhibitory interneurons"☆24Updated 6 years ago
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆45Updated 2 years ago
- Harmony framework for connecting scRNA-seq data from discrete time points☆50Updated last year
- Single-cell Orientation Tracing☆21Updated 3 years ago
- Mean Alterations Using Discrete Expression☆14Updated last year