Alternatives and similar repositories for CSFA

Users that are interested in CSFA are comparing it to the libraries listed below

• karthikcl2590 / NeuralTraj
  Matlab codepack for performing dimensionality reduction on neural data using TD-GPFA or GPFA.
  ☆20Updated 7 years ago
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆46Updated 5 years ago
• SainsburyWellcomeCentre / masiv
  MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data
  ☆14Updated 5 years ago
• JorritMontijn / ZETA
  Zenith of Event-based Time-locked Anomalies
  ☆14Updated last year
• DavidTingley / RnR_methods
  methods for detecting/quantifying reactivation and replay in neural data
  ☆12Updated 4 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆32Updated 2 months ago
• ACCLAB / DABEST-Matlab
  MATLAB package to generate contrast plots
  ☆35Updated 4 years ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆49Updated 9 months ago
• pillowlab / LNPfitting
  Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood
  ☆19Updated 7 years ago
• cortex-lab / Rigbox
  A MATLAB toolbox for running behavioral neuroscience experiments and managing data
  ☆33Updated last year
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆35Updated last year
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆53Updated 4 months ago
• DrugowitschLab / HippocampalSWRDynamics
  Code for Krause and Drugowitsch (2022). "A large majority of awake hippocampal sharp-wave ripples feature spatial trajectories with momen…
  ☆13Updated 2 years ago
• PridaLab / rippl-AI
  A open toolbox of several machine learning approaches for sharp-wave ripple detection
  ☆29Updated 11 months ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆42Updated 5 years ago
• tjd2002 / tjd-shared-code
  Neuroscience/electrophsyiology data analysis tools (mostly Matlab)
  ☆14Updated 6 years ago
• NeuroNetMem / neuroseries
  ☆13Updated 5 years ago
• zivlab / island
  Revealing neural correlates of behavior without behavioral measurements
  ☆14Updated 5 years ago
• nelpy / example-analyses
  Example analyses making extensive use of nelpy.
  ☆10Updated 6 years ago
• neoanalysis / NeoAnalysis
  ☆25Updated 4 years ago
• murthylab / GLMHMM
  ☆23Updated 5 years ago
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated 2 weeks ago
• nicholas-roy / psytrack
  ☆54Updated 4 months ago
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 4 months ago
• zashwood / glm-hmm
  Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…
  ☆49Updated last year
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 7 months ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆127Updated last year
• gloewing / photometry_FLMM
  Code for Functional Mixed Models for Fiber Photometry
  ☆11Updated last week
• spiketools / spiketools
  Tools for analyzing spiking data from single-neuron recodings.
  ☆27Updated 3 weeks ago