JaneliaSciComp / awesome-janelia-softwareLinks
A curated list of awesome Janelia software
☆17Updated 8 months ago
Alternatives and similar repositories for awesome-janelia-software
Users that are interested in awesome-janelia-software are comparing it to the libraries listed below
Sorting:
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11Updated 4 years ago
- A plugin that enables image segmentation provided by Allen Institute for Cell Science☆17Updated last week
- A GUI built on brainrender: visualise brain regions, neurons and labelled cells.☆12Updated 4 years ago
- A Python module for accessing Hamamatsu DCIMG files☆14Updated 2 years ago
- How to use Aligning Big Brains and Atlases with Python☆14Updated 2 years ago
- Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for …☆14Updated last month
- Create movies from series of key-frames in napari.☆38Updated 4 years ago
- ☆17Updated 2 years ago
- Brainways☆21Updated 2 months ago
- motion correction☆17Updated 2 years ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 7 months ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆12Updated last month
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Workshop materials for "I2K 2022: From Images to Knowledge" conference☆11Updated 3 years ago
- ☆45Updated 5 years ago
- Registration to BrainGlobe atlases in napari using Elastix☆24Updated 2 weeks ago
- Visualise brainreg registration output☆10Updated 3 years ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Updated last year
- Read and write files from the BrainGlobe neuroanatomy suite☆15Updated 2 weeks ago
- Tools for distributed alignment of massive images☆89Updated 2 months ago
- my first baby steps with Napari☆10Updated 5 years ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆23Updated last year
- ☆20Updated 7 years ago
- Matlab function to import ROIs from ImageJ☆27Updated 5 years ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Updated last week
- ☆12Updated 2 weeks ago
- ☆49Updated this week
- A napari plugin to analysis point spread functions.☆13Updated 7 months ago
- ☆37Updated 2 months ago
- ImageJ convenience layer for N5☆17Updated 2 weeks ago