Pytorch implementation of LocaNMF
☆36Feb 17, 2020Updated 6 years ago
Alternatives and similar repositories for locaNMF
Users that are interested in locaNMF are comparing it to the libraries listed below
Sorting:
- Tools to process widefield data☆12Jul 20, 2021Updated 4 years ago
- Image processing and tools for widefield imaging☆19Dec 7, 2019Updated 6 years ago
- Pre-processing pipeline for widefield data☆12Dec 11, 2020Updated 5 years ago
- non-parametric inference for convolutional filters in poisson glms☆13Sep 20, 2021Updated 4 years ago
- Compression, denoising and demixing of functional imaging recordings☆29Jul 11, 2018Updated 7 years ago
- ☆41Sep 29, 2021Updated 4 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆39Oct 18, 2023Updated 2 years ago
- Everything needed to replicate the figures from the paper "Engineering recurrent neural networks from task-relevant manifolds and dynamic…☆12Dec 5, 2019Updated 6 years ago
- Example analyses making extensive use of nelpy.☆10May 1, 2019Updated 6 years ago
- Analyze the waveform shape of neural oscillations.☆12Nov 14, 2018Updated 7 years ago
- Calculate phase-amplitude coupling in Python (and Matlab).☆27Sep 5, 2017Updated 8 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Sep 27, 2019Updated 6 years ago
- A python toolbox for locating and exporting brain regions from mouse brain images.☆12Oct 22, 2024Updated last year
- Motion estimation and registration of Neuropixels data☆14Aug 2, 2021Updated 4 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 4 years ago
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year
- ☆12Oct 19, 2023Updated 2 years ago
- UCLA Multiphoton Miniature Microscope☆16May 19, 2025Updated 9 months ago
- Python-based module for extracting from, converting between, and handling optical imaging data from several file formats. Inspired by Spi…☆16Updated this week
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆716Feb 19, 2026Updated 2 weeks ago
- Python tools for analysis of neurophysiology data☆37Oct 2, 2023Updated 2 years ago
- Tools to process widefield data☆20Aug 26, 2025Updated 6 months ago
- Code accompanying Steinmetz et al., 2019☆61Aug 9, 2021Updated 4 years ago
- A GUI and library for doing multi-fiber photometry☆18Oct 12, 2017Updated 8 years ago
- Trend Filter Denoising☆22Jul 30, 2021Updated 4 years ago
- Structure Index code repository☆18Jun 13, 2025Updated 8 months ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Aug 12, 2024Updated last year
- cell detection in calcium imaging recordings☆432Mar 1, 2026Updated last week
- Tips and tricks for make benefit glorious language of Python☆19Aug 28, 2019Updated 6 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Nov 14, 2024Updated last year
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆26Jan 26, 2026Updated last month
- Algorithm for automated source extraction from 1P data☆23Jun 16, 2023Updated 2 years ago
- neuro data analysis in python☆32Dec 10, 2018Updated 7 years ago
- ☆20Nov 25, 2016Updated 9 years ago
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆104Oct 27, 2023Updated 2 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆25Nov 7, 2022Updated 3 years ago
- ☆21Mar 3, 2022Updated 4 years ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Aug 18, 2018Updated 7 years ago