zhongzhd / ont_m6a_detectionLinks
☆10Updated 6 months ago
Alternatives and similar repositories for ont_m6a_detection
Users that are interested in ont_m6a_detection are comparing it to the libraries listed below
Sorting:
- Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data☆18Updated last year
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆19Updated 2 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- Whole genome workflows☆12Updated 10 months ago
- The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…☆14Updated 6 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…☆14Updated last year
- ☆22Updated last month
- Analyse RNA feature distributions.☆16Updated 9 months ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 7 months ago
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆14Updated last month
- An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data☆14Updated 4 months ago
- End-guided RNA assembler☆15Updated last month
- isoCirc☆10Updated last year
- Smooth-quantile Normalization Adaptation for Inference of co-expression Links☆16Updated 2 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 4 years ago
- single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)☆13Updated 2 years ago
- First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing☆14Updated 2 years ago
- ☆19Updated 2 years ago
- Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the…☆22Updated 2 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 6 months ago
- Method for performing genome-wide association like studies on neighborhoods identified on biological networks relevant for the phenotype …☆15Updated 2 years ago
- R Package for phasing of single cell Strand-seq data☆10Updated 8 months ago
- A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data☆10Updated 9 months ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data☆17Updated last year
- A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets☆13Updated 7 months ago