Alternatives and similar repositories for ont_m6a_detection

Users that are interested in ont_m6a_detection are comparing it to the libraries listed below

• timplab / nanoNOMe
  nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis
  ☆18Updated 2 years ago
• AmpliconSuite / AmpliconReconstructorOM
  Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
  ☆18Updated last year
• cyang235 / smooth-seq
  A pipeline for Smooth-seq data analysis.
  ☆10Updated 3 years ago
• yjx1217 / NanoTrans
  An integrated computational framework for comprehensive transcriptome analyses with Nanopore direct-RNA sequencing data
  ☆14Updated 2 months ago
• RouhanifardLab / PsiNanopore
  ☆9Updated last year
• sims-lab / CapCruncher
  Analysis tool for NG-Capture-C, Tri-C and Tiled-C data
  ☆9Updated 2 weeks ago
• Gregor-Mendel-Institute / bookend
  End-guided RNA assembler
  ☆15Updated 3 months ago
• KHP-Informatics / DNAscanv2
  DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring v…
  ☆14Updated last year
• ajank / balancer-paper
  Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…
  ☆10Updated 5 years ago
• Acribbs / TallyNN
  single-cell analysis workflows for double phosphoramidite barcode and UMI Correction (scCOLOR-seq)
  ☆13Updated 2 years ago
• bartongroup / differr_nanopore_DRS
  Scripts for identifying sites with differential error rates in mapped nanopore DRS data
  ☆11Updated 4 years ago
• shahcompbio / wgs
  Whole genome workflows
  ☆12Updated 8 months ago
• XiDsLab / TAGET
  ☆19Updated 2 years ago
• TNTurnerLab / HAT
  HAT is a set of tools for calling de novo variants from whole-genome sequencing data.
  ☆23Updated last year
• NatPRoach / c_elegans_dRNAseq_analysis
  Scripts used in the analysis of C elegans dRNAseq data
  ☆14Updated last year
• comprna / R2Dtool
  Analyse RNA feature distributions.
  ☆16Updated 7 months ago
• bartongroup / 2passtools
  Two pass alignment for long reads
  ☆22Updated 4 years ago
• yuansliu / minirmd
  ☆12Updated 2 years ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆13Updated 6 years ago
• czhu / FulQuant
  FulQuant pipeline to identify and quantify transcript isoforms based on Nanopore long-read data
  ☆9Updated 2 years ago
• Xinglab / isoCirc
  isoCirc
  ☆10Updated last year
• daewoooo / StrandPhaseR
  R Package for phasing of single cell Strand-seq data
  ☆10Updated 6 months ago
• uedaLabR / nanoDoc
  RNA modification detection using Nanopore raw reads with Deep One Class classification
  ☆19Updated 4 years ago
• ans4013 / ScisorWiz
  ScisorWiz: Differential Isoform Visualizer for Long-Read RNA Sequencing Data
  ☆17Updated last year
• ay-lab / ExTraMapper
  ExTraMapper is a tool to find Exon and Transcript-level Mappings of a given pair of orthologous genes between two organisms using sequenc…
  ☆11Updated 3 years ago
• splicebox / MntJULiP
  Comprehensive and scalable differential splicing analyses
  ☆17Updated 4 months ago
• gerstung-lab / deepSNV
  The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.
  ☆16Updated 3 years ago
• battle-lab / twn_tsn
  Transcriptome-wide network
  ☆16Updated 5 years ago
• XueyiDong / LongReadBenchmark
  Benchmarking long-read RNA-seq analysis tools
  ☆27Updated 5 months ago
• WGLab / AmpBinner
  A barcode demultiplexer for Oxford Nanopore long-read amplicon sequencing data
  ☆10Updated 7 months ago