XiDsLab / TAGET
☆17Updated 2 years ago
Alternatives and similar repositories for TAGET:
Users that are interested in TAGET are comparing it to the libraries listed below
- Identify and annotate TE-mediated insertions in long-read sequence data☆41Updated last year
- ☆33Updated last year
- ☆23Updated 2 years ago
- Invertory of TE-gene isoforms☆9Updated last year
- ☆21Updated 2 months ago
- ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.☆21Updated 3 months ago
- ☆23Updated 3 years ago
- ☆16Updated 4 years ago
- Reconstruction of focal amplifications with long reads☆18Updated this week
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Updated 2 months ago
- SpliceWiz is an R package for exploring differential alternative splicing events in splice-aware alignment BAM files.☆16Updated 5 months ago
- Allo: a multi-mapped read rescue strategy for gene regulatory analyses☆24Updated 6 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆56Updated last month
- Summarise and plot data from long-read ONT (direct RNA/cDNA) BAM files☆13Updated 11 months ago
- Long read to rMATS☆31Updated last year
- ☆36Updated 5 years ago
- R package: TopDom - An efficient and Deterministic Method for identifying Topological Domains in Genomes☆21Updated last year
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆17Updated 2 years ago
- ☆28Updated 3 months ago
- ☆18Updated 10 months ago
- Integrative analysis of complex structural variants☆21Updated 4 years ago
- Enabling differential allele-specific analysis☆11Updated 2 months ago
- HiCnv is used to call copy number variations and breakpoints from Hi-C data☆21Updated 11 months ago
- ☆16Updated 7 months ago
- GENE-SWitCH project RNA-Seq analysis pipeline☆26Updated 3 weeks ago
- toolkit to process gtf files☆17Updated 3 years ago
- ☆15Updated 2 years ago
- Hi-C Interaction Frequency Inference (HIFI): High-resolution estimation of DNA-DNA interaction frequency from Hi-C data☆23Updated 2 years ago
- R package to detect splicing QTLs (sQTLs)☆12Updated last year
- A pipeline to detect chimeric transcripts derived from genes and transposable elements.☆22Updated 8 months ago