MasaakiU / MultiplexNanoporeLinks
☆15Updated 6 months ago
Alternatives and similar repositories for MultiplexNanopore
Users that are interested in MultiplexNanopore are comparing it to the libraries listed below
Sorting:
- Realtime base modification frequency tool☆12Updated 3 weeks ago
- Determining tandem repeat lengths using raw nanopore signals.☆15Updated 2 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆19Updated 7 months ago
- Python3 Read Until API implementation☆11Updated 5 years ago
- Influenza genome analysis Nextflow workflow☆28Updated 3 weeks ago
- Nanopore UMI-linked consensus sequencing☆16Updated 4 years ago
- ☆12Updated last year
- Scalable Maximum Likelihood Estimation of Phylogenetic Models☆17Updated 7 months ago
- Scripts for identifying sites with differential error rates in mapped nanopore DRS data☆11Updated 4 years ago
- Nanopore Real-Time Analysis Tool☆15Updated last year
- Nanopanel2: a somatic variant caller for Nanopore panel sequencing data☆11Updated 4 years ago
- Ultra rapid nanopore whole genome sequencing pipeline, published in https://www.nature.com/articles/s41587-022-01221-5☆19Updated last year
- Python bindings for the TaxonKit library☆40Updated 3 months ago
- The RepeatScout 1.0.5, written by Pevzner et al., source code for browsing. The official release and more information are available at h…☆16Updated 2 years ago
- Nanopore direct RNA basecaller☆11Updated 2 years ago
- Private, browser-based placement of genome sequences on phylogenetic trees using UShER.☆11Updated 10 months ago
- Gap2Seq is a gap filling and insertion genotyping tool.☆22Updated last year
- A package for designing activity-informed nucleic acid diagnostics for viruses.☆34Updated 2 years ago
- ☆17Updated 2 years ago
- An RNA virus strain-level identification tool for short reads.☆22Updated last year
- Codes and results from ONT dRNA benchmarking☆11Updated last year
- Alignment and variant-calling pipeline for Illumina HIV sequences.☆11Updated 5 years ago
- ☆16Updated 3 weeks ago
- Hybridization probe design for targeted genomic sequencing of diverse and hypervariable viral taxa☆25Updated 2 years ago
- Code for detecting genomic island insertions in clades of microbes.☆19Updated 2 years ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆35Updated last year
- A Quality Control filter and parser for NCBI BLAST XML results.☆17Updated 5 years ago
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- Convert genbank files to a swath of other formats☆20Updated 2 years ago
- Learning and Aligning Large Protein Families with support of protein language models.☆27Updated last week