The Functional Analysis through Hidden Markov Models Software and Server
☆14Nov 6, 2014Updated 11 years ago
Alternatives and similar repositories for fathmm
Users that are interested in fathmm are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Detect key Units in mosaic Tandem Repeats from representative reads from the same locus☆10Aug 2, 2023Updated 3 years ago
- ☆10Mar 11, 2025Updated last year
- Documentation and tutorials worth sharing.☆10Dec 7, 2022Updated 3 years ago
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Dec 26, 2022Updated 3 years ago
- Predict the functional consequences of both coding and non-coding single nucleotide variants (SNVs)☆19Mar 18, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆11Apr 25, 2024Updated 2 years ago
- ☆49Jan 7, 2025Updated last year
- ☆10May 15, 2021Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Nov 18, 2025Updated 10 months ago
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated 2 months ago
- Application for inferring subclonal composition and evolution from whole-genome sequencing data.☆113Oct 12, 2022Updated 3 years ago
- Subclonal Hierarchy Inference from Somatic Mutations☆21Feb 25, 2025Updated last year
- Lots of plots, various labeling, axis and color scaling functions.☆13Jul 15, 2026Updated 2 months ago
- Probabilistic model for inferring clonal population structure from deep NGS sequencing.☆126Aug 19, 2020Updated 6 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆18Jul 13, 2026Updated 2 months ago
- Structural variant caller for low-depth long-read sequencing data☆50Feb 5, 2026Updated 7 months ago
- Explore, compare, and evaluate Bioconductor packages related to genomic copy number analysis☆21Mar 15, 2023Updated 3 years ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- Freddie: Annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing☆17Nov 29, 2022Updated 3 years ago
- Associations of genomic features, drugs and diseases☆48Dec 8, 2022Updated 3 years ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆27Apr 29, 2024Updated 2 years ago
- Integrated copy number variation detection toolset☆26Feb 12, 2020Updated 6 years ago
- ☆18Jan 13, 2023Updated 3 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Repo for downloading and storing OMIM data☆20Oct 6, 2016Updated 9 years ago
- DeCiFer is an algorithm that simultaneously selects mutation multiplicities and clusters SNVs by their corresponding descendant cell frac…☆22May 21, 2024Updated 2 years ago
- ☆52Jun 25, 2024Updated 2 years ago
- Calling deletions using deep convolutional neural☆26Feb 12, 2020Updated 6 years ago
- Course materials for "Variants Annotate and Phenotype Analysis"☆22Jun 18, 2021Updated 5 years ago
- Inverted Repeats Finder: a program to analyze DNA and RNA sequences☆22Feb 21, 2025Updated last year
- The 3rd incarnation of the Wise package for sequence analysis☆23Jun 19, 2014Updated 12 years ago
- dN/dS methods to quantify selection in cancer and somatic evolution☆240Aug 25, 2026Updated 3 weeks ago
- RNA sequence design for a target protein sequence☆13Jun 2, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A deep-learning framework for predicting a full range of structural variations from bulk and single-cell contact maps☆63Aug 28, 2025Updated last year
- Code accompanying Precision oncology for acute myeloid leukemia using a knowledge bank approach☆29Mar 25, 2019Updated 7 years ago
- fastx-utils using klib☆19Sep 1, 2020Updated 6 years ago
- GCAP (Gene-level Circular Amplicon Prediction) firstly implements extrachromosomal DNA detection from whole-exome-sequencing (WES) data a…☆21Jul 1, 2026Updated 2 months ago
- ☆30Feb 5, 2021Updated 5 years ago
- SV clustering☆32Jul 5, 2021Updated 5 years ago
- Scripts to design DropSynth oligos☆16Dec 2, 2020Updated 5 years ago