Alternatives and similar repositories for colon_microbiopsies

Users that are interested in colon_microbiopsies are comparing it to the libraries listed below

• wulabupenn / scNT-seq
  Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)
  ☆16Updated 2 years ago
• crazyhottommy / single-cell-DNAseq-notes
  ☆16Updated 2 years ago
• liulab-dfci / TRUST4_manuscript_evaluation
  TRUST4 manuscript evaluation
  ☆15Updated 3 years ago
• vincenthahaut / FLASH-Seq
  ☆10Updated 3 years ago
• bioinfo-biols / Code_for_circSC
  Analysis pipeline for our circSC manuscript
  ☆13Updated 3 years ago
• pablo-gar / somatic_mutations_GTEx
  Methods and analysis for Garcia-Nieto, et al. Somatic mutations
  ☆15Updated 5 years ago
• scottzijiezhang / MeRIPtools
  ☆8Updated 3 years ago
• de-Boer-Lab / MAUDE
  Mean Alterations Using Discrete Expression
  ☆14Updated last year
• flemingtonlab / SpliceTools
  ☆17Updated last year
• icbi-lab / NeoFuse
  NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.
  ☆19Updated 2 years ago
• comprna / ORQAS
  ORF Quantification pipeline for Alternative Splicing
  ☆16Updated 4 years ago
• BIMSBbioinfo / HOT-or-not-examining-the-basis-of-high-occupancy-target-regions
  HOT regions paper
  ☆11Updated 6 years ago
• cboix / epimap_vis
  Code for EpiMap data browser
  ☆14Updated last year
• ShixiangWang / Variants2Neoantigen
  A neoantigen calling pipeline begins from variants record file (MAF) (Not maintain now)
  ☆29Updated 5 years ago
• khuranalab / CompositeDriver
  Combined mutation recurrence and functional impact to identify coding and non-coding cancer drivers
  ☆15Updated 6 years ago
• amf71 / ECLIPSE
  ☆11Updated 2 years ago
• YuLab-SMU / clusterProfiler_protocol
  omics data analysis using clusterProfiler ;)
  ☆13Updated last year
• yupenghe / encode_dna_dynamics
  Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"
  ☆11Updated 4 years ago
• dieterich-lab / CircTest
  CircRNA testing and ploting R package
  ☆10Updated 4 years ago
• Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel
  ☆15Updated 2 years ago
• smlmbrt / SimilarityRegression
  Predicting TF sequence-specificity similarity with weighted alignments
  ☆13Updated 5 years ago
• frattalab / splicing
  Snakemake pipeline for running MAJIQ
  ☆23Updated last year
• vanallenlab / retained-intron-neoantigen-pipeline
  Pipeline to call neoantigens from intron retention events derived from RNA-Seq data.
  ☆28Updated 4 years ago
• MarioniLab / sarlacc
  The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, cl…
  ☆14Updated 6 years ago
• yizhak-lab-ccg / RNA_MUTECt_WMN
  ☆23Updated 3 years ago
• Core-Bioinformatics / bulkAnalyseR
  ☆28Updated last year
• astheeggeggs / BipEx
  ☆10Updated last year
• egaffo / CirComPara
  A multi-method comparative bioinformatics pipeline to detect and study circRNAs from RNA-seq data
  ☆16Updated 5 years ago
• crazyhottommy / scCustomize
  Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.
  ☆16Updated 3 years ago
• wanqingshao / TE_expression_in_scRNAseq
  ☆18Updated 4 years ago