ysuzukilab / CibersortxLinks
Repository for Cibersortx
☆61Updated 4 years ago
Alternatives and similar repositories for Cibersortx
Users that are interested in Cibersortx are comparing it to the libraries listed below
Sorting:
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆81Updated 3 years ago
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆58Updated 3 weeks ago
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆80Updated 7 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- ☆89Updated 3 months ago
- ☆34Updated 6 years ago
- ☆116Updated 3 months ago
- ☆48Updated 11 months ago
- SNV calling from single cell sequencing☆116Updated last year
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆80Updated 9 months ago
- Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.☆95Updated 2 years ago
- ☆63Updated 5 years ago
- scWGCNA☆61Updated 3 years ago
- ☆73Updated 2 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 4 years ago
- Create cisTarget databases☆54Updated 5 months ago
- Processing pipeline scripts for sci-RNA-seq3 (bash, R, python)☆44Updated 4 years ago
- Code repository for single cell RNA-seq☆39Updated 5 years ago
- Single cell RNA-seq analysis bundle☆37Updated 6 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆38Updated last year
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 5 years ago
- Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).☆47Updated last year
- Single Cell Analysis of Five'Ends☆50Updated last year
- Analysis of Paired-Tag datasets☆43Updated last year
- Pipeline for initial analysis of droplet-based single-cell RNA-seq data☆95Updated 3 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 7 months ago
- Tutorial of single-cell RNA-ATAC multiomic sequencing data analysis☆68Updated last year