horsedayday / eQTLsingle
☆13Updated last year
Related projects: ⓘ
- Obtain trait-relevant cell subpopulations by incorporating pathway activity transformed scRNA-seq data with GWAS data☆13Updated 4 months ago
- Functions for single cell data analysis☆22Updated 3 years ago
- A robust and accurate cell type classifier for single cell RNA-seq data☆16Updated last year
- Spatial transcriptomics of heart tissue☆16Updated 2 years ago
- Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)☆12Updated last year
- ☆28Updated 2 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆12Updated last year
- Code for the manuscript "Single-cell analysis of human primary prostate cancer reveals the heterogeneity of tumor-associated epithelial c…☆18Updated 2 years ago
- ☆18Updated 6 months ago
- ☆32Updated 2 years ago
- ☆29Updated 3 years ago
- ☆26Updated 6 months ago
- identifying disease critical cell types and programs from single cell RNAseq☆48Updated 2 years ago
- code for data processing and visualisation associated with the stromal subclasses manuscript☆11Updated 3 years ago
- MultiK is a data-driven tool that objectively assesses the optimal number(s) of clusters based on the concept of consensus clustering via…☆20Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆20Updated 8 months ago
- Codes for the scPLC project☆47Updated last year
- Scripts and notebooks to reproduce all analysis from Massoni-Badosa et al. (2022)☆22Updated 3 months ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆27Updated 3 years ago
- ☆17Updated 5 months ago
- ☆28Updated 4 months ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆18Updated 4 months ago
- Single cell RNA-seq analysis bundle☆30Updated 5 years ago
- ☆17Updated 3 years ago
- ☆22Updated last year
- R code used to analyze single cell PDAC data☆28Updated 2 months ago
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆17Updated 2 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆24Updated 2 years ago
- ☆40Updated 4 years ago
- single-cell clustering based on alternative splicing landscapes☆12Updated 6 months ago