RausellLab / CelliDLinks
Gene signature extraction and cell-identity recognition at individual cell level from single-cell RNA-seq.
☆95Updated last year
Alternatives and similar repositories for CelliD
Users that are interested in CelliD are comparing it to the libraries listed below
Sorting:
- ☆62Updated 6 years ago
- Analysis of cell-cell communication at single-cell resolution☆104Updated last year
- STARTRAC(Single T-cell Analysis by Rna-seq and Tcr TRACking)☆109Updated 5 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- R package for Pathway RespOnsive GENe activity inference☆108Updated 2 years ago
- Inference of cell-cell communication from single-cell RNAseq data☆48Updated 5 months ago
- inferring cell-cell communication from scRNA-seq of ligand-receptor☆84Updated last year
- Publication Page for Satpathy*, Granja* et al 2019☆95Updated 5 years ago
- ☆73Updated 2 years ago
- R package for Protein activity analysis of single-cell RNAseq.☆83Updated 2 years ago
- Infer Copy Number Alterations and Clonality in (Single-Cell) RNA-Seq Data☆43Updated last year
- scGSVA: Perform GSVA for single cell RNA seq☆65Updated 10 months ago
- A tool for unsupervised projection of single cell RNA-seq data☆95Updated 4 years ago
- R package that automatically classifies the cells in the scRNA data by segregating non-malignant cells of tumor microenviroment from the …☆112Updated last month
- Coarse-graining of large single-cell RNA-seq data into metacells☆89Updated 3 months ago
- Methods to compute Local Inverse Simpson's Index (LISI)☆68Updated 4 years ago
- A tool for removing doublets from single-cell RNA-seq data☆75Updated 4 years ago
- ☆63Updated 5 years ago
- Efficient and precise single-cell reference atlas mapping with Symphony☆110Updated 2 years ago
- ☆41Updated 4 years ago
- R Package for Single-Cell Dataset Processing and Visualization☆64Updated 4 years ago
- mutation(barcode) caller for 10x single cell data☆45Updated 5 years ago
- A R package for advanced single cell data viz☆68Updated last month
- Draw phylogenetic trees of tumor evolution☆86Updated 2 years ago
- SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples☆71Updated 3 years ago
- Pipeline for exploring metebolic heterogeneity at single-cell resolution☆74Updated 5 years ago
- Single cell RNA-seq analysis bundle☆36Updated 6 years ago
- R package for semi-supervised single-cell data integration☆90Updated last month
- Assessing the purity of single cell population☆136Updated 3 years ago
- scWGCNA☆61Updated 2 years ago