tiroshlab / Spatial_GliomaLinks
Code for major analyses in "Integrative spatial analysis reveals a multi-layered organization of glioblastoma" paper
☆52Updated 8 months ago
Alternatives and similar repositories for Spatial_Glioma
Users that are interested in Spatial_Glioma are comparing it to the libraries listed below
Sorting:
- ☆31Updated 6 months ago
- Data available at: https://www.dropbox.com/sh/jh4s57kgbb0rnxe/AABoMK466cGc1OKsOuFN10wca?dl=0 and https://nyulangone-my.sharepoint.com//g/…☆31Updated 3 years ago
- ☆22Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆61Updated 2 years ago
- ☆31Updated last year
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆20Updated 2 years ago
- Construct Tumor Transition Zone Microenvironment☆48Updated 2 months ago
- Code for the spatial transcriptomic paper on IPF lungs☆19Updated last year
- Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcript…☆28Updated last year
- Spatial transcriptomics of heart tissue☆24Updated 3 years ago
- ☆17Updated 2 years ago
- Single Cell Analysis Operations☆13Updated 6 months ago
- ☆47Updated 3 years ago
- Niche Interactions and Cellular Heterogeneity in Extracellular Signaling☆56Updated 4 months ago
- ☆17Updated last year
- ☆48Updated last year
- Unsupervised Inference of Developmental Directions for Single Cells☆22Updated last year
- Estimation of Single-Cell Potency with Single Cell Entropy☆42Updated 2 years ago
- Clone Calling from Visium Spatial Transcriptomics of Cancer samples☆78Updated 2 years ago
- ☆32Updated last year
- ☆41Updated last month
- ☆21Updated 2 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆73Updated last month
- sEV-containing droplet identification in scRNA-seq data (SEVtras)☆26Updated 6 months ago
- ☆31Updated 3 years ago
- Lung cancer 10X analysis☆11Updated 4 years ago
- Single-Cell Inference of Class Switch Recombination☆19Updated last week
- Single-cell RNA-seq data-based inference of multilayer inter- and intra-cellular signaling networks☆27Updated 4 years ago
- ☆27Updated last week
- R code used to analyze single cell PDAC data☆38Updated last year