☆12Dec 15, 2020Updated 5 years ago
Alternatives and similar repositories for AnalysisPipeline-NGS
Users that are interested in AnalysisPipeline-NGS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- STAR, cufflinks, cluster, DESeq2, GO analysis☆14Jun 27, 2020Updated 5 years ago
- Dot2dot: Accurate Whole-Genome Tandem Repeats Discovery☆11Oct 5, 2022Updated 3 years ago
- Multi-omics analysis protocols by Lyu.☆53Aug 22, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Reanalyze of GSE111527 scRNA-seq data☆20May 30, 2020Updated 5 years ago
- ☆11May 4, 2021Updated 4 years ago
- ☆73Aug 16, 2022Updated 3 years ago
- General analysis of HiC data, including compartment A/B, domains and loops.☆14Feb 17, 2023Updated 3 years ago
- CRCmapper: map core regulatory circuitry☆14Nov 23, 2020Updated 5 years ago
- RNA-seq analysis scripts☆16Jan 8, 2026Updated 2 months ago
- single cell and bulk RNASeq analysis scripts☆14Jan 13, 2022Updated 4 years ago
- ☆18Aug 19, 2019Updated 6 years ago
- This is code for running Orthofinder -> PAML☆12Jul 27, 2016Updated 9 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆13Oct 7, 2019Updated 6 years ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- ☆16Mar 9, 2019Updated 7 years ago
- ☆17May 30, 2022Updated 3 years ago
- ☆12Jul 19, 2019Updated 6 years ago
- Detection of super-enhancers in cancer data☆21Apr 10, 2023Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆14May 18, 2022Updated 3 years ago
- It's just a personal record for studying how to analysis TCGA data(expression+mutation+methylation+CNV)☆20Dec 28, 2016Updated 9 years ago
- A pipeline for identifying conserved topologically associating domain boundaries among multiple species.☆16Jun 17, 2025Updated 9 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Scripts and procedures for detecting positively selected genes and codons in primates☆22Nov 14, 2020Updated 5 years ago
- 在R语言中使用ChatGPT(中国大陆版)☆12Mar 17, 2023Updated 3 years ago
- Convert PDB residues to their Uniprot equivalents☆17Mar 31, 2020Updated 5 years ago
- ☆10Jul 15, 2016Updated 9 years ago
- ☆12Dec 5, 2018Updated 7 years ago
- ☆18Mar 12, 2024Updated 2 years ago
- Python interface to cd-hit☆10Feb 26, 2019Updated 7 years ago
- DiffDomain is a statistically sound method for detecting differential TADs between conditions☆17Jun 27, 2025Updated 9 months ago
- PhyloAcc a software to detect the changes of conservation of a genomic region☆35Feb 4, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- ☆10Aug 22, 2018Updated 7 years ago
- ChIP-seq pipeline tool for quality check, normalization, statistical analysis, and visualization of multiple ChIP-seq samples.☆24Mar 16, 2026Updated last week
- Differential Hi-C Data Analysis Workshop https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.76☆15Apr 10, 2021Updated 4 years ago
- scripts for analyzing the CVDC data.☆20Dec 5, 2019Updated 6 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆65Nov 14, 2025Updated 4 months ago
- We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies☆18Feb 4, 2022Updated 4 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Sep 25, 2019Updated 6 years ago