Pipelines for Drosophila genome assembly and analysis
☆16May 15, 2022Updated 3 years ago
Alternatives and similar repositories for drosophila_assembly_pipelines
Users that are interested in drosophila_assembly_pipelines are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- small scripts, functions or bits of code for parsing genomic data☆14Sep 24, 2022Updated 3 years ago
- Custom scripts for monotreme genome project☆19Jan 12, 2021Updated 5 years ago
- Figures for the CHM13 T2T SD paper.☆11Sep 12, 2021Updated 4 years ago
- Plot genome alignment figure using progressiveMauve & genoPlotR☆22Aug 5, 2022Updated 3 years ago
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This is a basic repository with all the scripts necessary to reconstruct the data analysis from our work on the 200 Genomes☆12Aug 31, 2018Updated 7 years ago
- Killifish genomics scripts☆12Feb 19, 2021Updated 5 years ago
- ☆25Jun 8, 2022Updated 3 years ago
- Code for TAD_SV project☆11Mar 16, 2022Updated 4 years ago
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- Some useful bioinformatics pipelines for genomics analysis☆14May 25, 2021Updated 4 years ago
- ☆10Feb 25, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- easy_sbatch - Batch submitting Slurm jobs with script templates☆16Dec 28, 2021Updated 4 years ago
- Assemble and following pipeline used in wisent genome paper.☆17Dec 23, 2016Updated 9 years ago
- Scripts of population genomics analysis☆36May 8, 2018Updated 7 years ago
- collection of bioinformatic scripts☆32May 3, 2024Updated last year
- Bioinformatics pipelines for Resolwe☆19Mar 24, 2026Updated 3 weeks ago
- Make Pseudo-Reference Genome from VCF/BCF☆14Oct 5, 2020Updated 5 years ago
- ☆15Nov 28, 2022Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- Genome Annotation Pipeline☆43Aug 20, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Construct ab initio gene prediction using only BUSCO augustus models. Add in transcriptome for extra support☆22Sep 13, 2023Updated 2 years ago
- ☆13Mar 24, 2026Updated 3 weeks ago
- PyPop: Python for Population Genomics☆25Updated this week
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 26, 2026Updated last month
- The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform …☆24Jul 4, 2023Updated 2 years ago
- Toy files and training material to introduce Linux to molecular biologists☆22Jul 21, 2023Updated 2 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆46Jan 28, 2026Updated 2 months ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- A pipeline for whole genome assembly☆16Apr 21, 2022Updated 3 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- ☆10May 17, 2022Updated 3 years ago
- Notes by Markdown in HZAU Bioinformatics Courses☆13Dec 16, 2025Updated 4 months ago