lurebgi / BOPsexChrLinks
Analyses of sex chromosome evolution in songbirds
☆16Updated 6 years ago
Alternatives and similar repositories for BOPsexChr
Users that are interested in BOPsexChr are comparing it to the libraries listed below
Sorting:
- ☆40Updated 2 years ago
- Centromics: visualing centromeres with multiple omics data☆23Updated 4 months ago
- scripts for the project of seven thaliana genomes assembly☆40Updated 4 years ago
- A tool for quick and accurate calculation of syntenic diversity.☆41Updated 5 months ago
- ☆12Updated 2 years ago
- R package to draw syntenic plots in 3 different styles☆41Updated last year
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆33Updated 9 months ago
- ☆24Updated last year
- ☆21Updated 11 months ago
- A tool for performing collinearity-incorporating homology inference☆32Updated last year
- A shiny application to visualize MCscan result☆37Updated 2 years ago
- ☆34Updated 10 months ago
- A genome assembly assessment pipeline.☆37Updated last year
- Automated pipeline for running CoalHMM☆13Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆30Updated 5 months ago
- ☆22Updated 3 years ago
- ☆12Updated 5 years ago
- ☆30Updated 6 months ago
- ☆25Updated 3 years ago
- Likelihood-based Selective Sweep Detection☆39Updated last year
- ☆41Updated 2 years ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆35Updated last year
- Dynamic Elongation of a Genome Assembly Path☆21Updated last year
- ☆30Updated 4 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆31Updated 6 months ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆9Updated 4 months ago
- Centromics: visualing centromeres with multiple omics data☆19Updated last year
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago