lurebgi / BOPsexChrLinks
Analyses of sex chromosome evolution in songbirds
☆16Updated 6 years ago
Alternatives and similar repositories for BOPsexChr
Users that are interested in BOPsexChr are comparing it to the libraries listed below
Sorting:
- Centromics: visualing centromeres with multiple omics data☆25Updated 10 months ago
- ☆41Updated 2 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- ☆21Updated last year
- Dynamic Elongation of a Genome Assembly Path☆25Updated last month
- scripts for the project of seven thaliana genomes assembly☆42Updated 4 years ago
- ☆32Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆34Updated 3 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 4 months ago
- A tool for performing collinearity-incorporating homology inference☆33Updated 2 years ago
- ☆44Updated 6 months ago
- ☆12Updated 2 years ago
- A shiny application to visualize MCscan result☆38Updated 3 years ago
- ☆26Updated this week
- ☆28Updated 3 years ago
- ☆12Updated 6 years ago
- a Semi-automated pipeline for assembling T2T genome☆25Updated 3 months ago
- Automated pipeline for running CoalHMM☆13Updated 3 weeks ago
- Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates…☆42Updated last year
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 11 months ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com…☆37Updated last year
- ☆31Updated 9 months ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Updated 6 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 7 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆45Updated last year
- MITE Tracker: An accurate approach to identify miniature inverted-repeat transposable elements in large genomes☆20Updated last year
- Scripts that used in our chicken T2T manuscript.☆22Updated 2 weeks ago
- Pooled Sequencing Analysis for Sex Signal☆12Updated 4 years ago
- A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files☆36Updated 3 years ago