Alternatives and similar repositories for AnnotationPipeline-EVM_based-DClab:

Users that are interested in AnnotationPipeline-EVM_based-DClab are comparing it to the libraries listed below

• shingocat / syntenyPlotByR
  plot genome alignment synteny
  ☆20Updated 4 years ago
• andreaminio / HaploSync
  Tools for haplotype-wise reconstruction of pseudomolecules
  ☆20Updated 4 months ago
• LAILAB-CAU / update-Mo17
  ☆23Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆20Updated last year
• NBISweden / TransposonPSI
  TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…
  ☆13Updated 4 years ago
• JM-SONG / GenomeSyn
  ☆22Updated 2 years ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 6 months ago
• tangerzhang / calc_switchErr
  ☆25Updated 3 years ago
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆23Updated 4 years ago
• thamala / PBScan
  Selection outlier scan with population branch statistic
  ☆13Updated last year
• wangziwei08 / LTR-insertion-time-estimation
  ☆15Updated last year
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated 3 months ago
• Kirovez / pyTanFinder
  Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results
  ☆12Updated 5 years ago
• lardo / khaper
  ☆27Updated 2 years ago
• qclian / Pan_Ath
  Code for Article "A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species r…
  ☆17Updated 8 months ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆38Updated last year
• Adamtaranto / TRF2GFF
  Convert Tandem Repeat Finder dat file output into gff3 format
  ☆24Updated last month
• jkimlab / DESCHRAMBLER
  ☆21Updated 11 months ago
• schneebergerlab / GameteBinning
  ☆12Updated 4 years ago
• sanger-tol / yahs
  Yet another Hi-C scaffolding tool
  ☆19Updated 3 months ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆25Updated 3 years ago
• dawelab / Ab10-Assembly
  B73Ab10 genome assembly methods
  ☆16Updated 3 years ago
• ShuaiNIEgithub / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆17Updated last year
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• ComparativeGenomicsToolkit / neutral-model-estimator
  Simple pipeline to go from an alignment to a neutral model, using the PHAST toolkit
  ☆11Updated 5 years ago
• SwallowGenomics / BarnSwallow
  ☆12Updated last year
• YaoZhou89 / WGSc
  ☆16Updated 3 years ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆24Updated 3 weeks ago
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated 9 months ago