YuLab-SMU / clusterProfiler_protocol
omics data analysis using clusterProfiler ;)
☆11Updated 5 months ago
Related projects ⓘ
Alternatives and complementary repositories for clusterProfiler_protocol
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 3 years ago
- ☆16Updated last year
- ☆10Updated 3 weeks ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆20Updated 2 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- ☆14Updated 2 years ago
- ☆23Updated 3 years ago
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆17Updated 5 years ago
- Analysis and visualization of RNA-Seq results☆20Updated 2 weeks ago
- ☆18Updated 4 months ago
- RNA-seq analysis scripts☆15Updated 2 years ago
- Advanced steps of the OSCA book☆12Updated 2 weeks ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆23Updated 2 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Updated 3 months ago
- A Snakemake pipeline for Quality Control of Whole Genome Sequencing data☆13Updated 2 years ago
- Analysis pipeline for our circSC manuscript☆12Updated 2 years ago
- Computational analyses of WGS, mate-pair, RNA-seq, Hi-C and Capture-C data from highly rearranged balancer chromosomes in Drosophila mela…☆10Updated 5 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆15Updated 2 years ago
- CNAqc - Copy Number Alteration (CNA) Quality Check package☆17Updated 3 weeks ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 3 years ago
- ☆15Updated 4 years ago
- ASCETIC (Agony-baSed Cancer EvoluTion InferenCe) is a novel framework for the inference of a set of statistically significant temporal pa…☆11Updated 3 weeks ago
- Scripts used for the ACT paper☆12Updated 3 years ago
- a tool for summarizing and integrating gene-set analysis results☆16Updated 3 months ago
- Extract Sequence from Genome According to Annotation File☆29Updated last week
- ☆20Updated last year
- ☆22Updated last year
- Predicting TF sequence-specificity similarity with weighted alignments☆12Updated 5 years ago
- ☆16Updated 4 years ago
- Workflow for Sequenza, cellularity and ploidy☆18Updated 4 months ago