YuLab-SMU / clusterProfiler_protocol
omics data analysis using clusterProfiler ;)
☆13Updated 11 months ago
Alternatives and similar repositories for clusterProfiler_protocol
Users that are interested in clusterProfiler_protocol are comparing it to the libraries listed below
Sorting:
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆19Updated 6 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- ☆15Updated 2 years ago
- ☆17Updated 2 years ago
- Collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆16Updated 3 years ago
- scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper☆24Updated 2 years ago
- ☆11Updated 5 years ago
- An R package for time course sequencing data analysis☆19Updated 2 years ago
- ☆17Updated 9 months ago
- Pipeline to analyze long-read mRNA isoforms and ORF products sequenced in breast cancer using PacBio Single-Molecule technology.☆15Updated 2 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- ☆10Updated last week
- SCASA: Single cell transcript quantification tool☆21Updated last year
- Analysis pipeline for our circSC manuscript☆13Updated 2 years ago
- ☆20Updated last year
- A collection of perl scripts for NGS analysis☆16Updated 7 months ago
- BioCarta pathway images☆11Updated last year
- Function Enrichment analysis and Network construction☆11Updated last month
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- Analysis and visualization of RNA-Seq results☆29Updated 4 months ago
- Batch Correction and Adaptive Contrast Calling in Complex RNA-seq Experimental Designs Using DESeq2☆15Updated 2 weeks ago
- Bioinformatics Pipeline☆13Updated 2 years ago
- ☆17Updated 4 years ago
- ChromSCape☆14Updated last year
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- ☆15Updated 2 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆13Updated 2 years ago
- West Coast Dream Team Whole Genome Bisulfite Sequencing☆15Updated 4 years ago