YuLab-SMU / clusterProfiler_protocolLinks
omics data analysis using clusterProfiler ;)
☆13Updated last year
Alternatives and similar repositories for clusterProfiler_protocol
Users that are interested in clusterProfiler_protocol are comparing it to the libraries listed below
Sorting:
- A R script to perform clustering of gene expression time-series RNA-seq data with Mfuzz.☆22Updated 6 years ago
- ☆16Updated 2 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- ☆17Updated last year
- Bioinformatics Pipeline☆13Updated 2 years ago
- ☆17Updated 2 years ago
- Predicting TF sequence-specificity similarity with weighted alignments☆13Updated 5 years ago
- GWAS and rare variants tests at high speed using regenie☆15Updated 8 months ago
- HOT regions paper☆11Updated 6 years ago
- Analysis and visualization of RNA-Seq results☆30Updated 3 months ago
- ☆20Updated last year
- Code and files accompanying article "The landscape of somatic mutation in normal colorectal epithelial cells"☆11Updated 4 years ago
- R package to calculate the Aneuploidy Score from Chromosome Arm-level SCNAs/Aneuploidies (CAAs) as outlined and expanded by Shukla et al.…☆16Updated 4 years ago
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆19Updated 3 years ago
- Suite of analysis tools for spatial total RNA-sequencing☆12Updated 2 years ago
- ☆10Updated 3 years ago
- TRUST4 manuscript evaluation☆15Updated 3 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆12Updated 2 years ago
- Data analysis pipeline for scNT-seq (single-cell metabolically labeled new RNA tagging sequencing)☆16Updated 2 years ago
- An R package for time course sequencing data analysis☆20Updated 2 years ago
- An R package to implement Differential Gene Set Enrichment Analysis (DGSEA): A statistical approach to quantify the relative enrichment o…☆14Updated 2 years ago
- BioCarta pathway images☆11Updated last year
- Advanced steps of the OSCA book☆13Updated 4 months ago
- Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.☆18Updated 2 years ago
- A pipeline for Smooth-seq data analysis.☆10Updated 3 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆21Updated 3 years ago
- Collection of R functions used in the Hochwagen Lab☆12Updated 3 weeks ago
- lncHOME (lncRNA Homology Explorer), a computational pipeline that identifies a unique coPARSE-lncRNA class with conserved genomic locatio…☆13Updated last year
- A collection of perl scripts for NGS analysis☆16Updated 10 months ago
- Analysis pipeline for our circSC manuscript☆13Updated 3 years ago