RNA-seq analysis scripts
☆16Jan 8, 2026Updated last month
Alternatives and similar repositories for RNA-seq
Users that are interested in RNA-seq are comparing it to the libraries listed below
Sorting:
- Python Scripts for Bioinformatics☆15Apr 24, 2024Updated last year
- ☆10Feb 25, 2024Updated 2 years ago
- Tutorial on survival modeling with omics data☆11Mar 12, 2025Updated 11 months ago
- This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly avail…☆12Sep 6, 2021Updated 4 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- [知识管理]A simple yet powerful blog system for reading and organizing txt/Markdown/html files, based on PHP. 订阅/关注请点顶部的 Watch，收藏/点赞请点顶部的Sta…☆17Feb 24, 2026Updated last week
- collection of bioinformatic scripts☆32May 3, 2024Updated last year
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 2 years ago
- Detection of super-enhancers in cancer data☆21Apr 10, 2023Updated 2 years ago
- My R scripts, primarily R plotting scripts + some genomics software including 16S rRNA metataxnomics and RNAseq☆12Dec 19, 2022Updated 3 years ago
- Repository☆10Oct 23, 2024Updated last year
- ☆24Nov 9, 2017Updated 8 years ago
- Genome-wide association studies (GWAS) for ordered categorical phenotypes☆23Updated this week
- bioinformatics learning☆13Oct 10, 2023Updated 2 years ago
- Analysis of Dual RNA-seq data - an experimental method for interrogating host-pathogen interactions through simultaneous RNA-seq.☆25Jun 26, 2025Updated 8 months ago
- A collection of python and bash scripts for various bioinformatics-related tasks☆12Sep 19, 2024Updated last year
- ☆10Dec 2, 2025Updated 3 months ago
- RIESLING: Super-enhancer identification. (Rapid Identification of EnhancerS LInked to Nearby Genes)☆10Jun 28, 2018Updated 7 years ago
- Gene Prediction using MAKER, CEGMA, SNAP, GENEMARK & AUGUSTUS☆10Jul 20, 2017Updated 8 years ago
- An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictog…☆13Feb 22, 2026Updated last week
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 2 years ago
- ☆10Jan 30, 2020Updated 6 years ago
- A set of workflows written in Nextflow for Genome Annotation.☆46Jan 28, 2026Updated last month
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- A Python library for reading and manipulating genetic data.☆23Nov 2, 2024Updated last year
- Pipeline for generating RNAseq-based cancer patient reports☆11Updated this week
- ☆10Apr 13, 2022Updated 3 years ago
- ☆12Dec 15, 2020Updated 5 years ago
- ☆13Sep 7, 2022Updated 3 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- My attempts at recreating the visualisations by W.E.B. DuBois as part of the DuBois Challenge.☆11Jan 5, 2023Updated 3 years ago
- My submissions for the #30DayChartChallenge held on April 2022☆14May 11, 2022Updated 3 years ago
- ☆11May 4, 2021Updated 4 years ago
- Fine mapping of genes associated with Parkinson's Disease using a variety of methods☆11Mar 7, 2022Updated 3 years ago
- Direct RNA publication scripts☆11Sep 20, 2017Updated 8 years ago
- PhenomeXcan: mapping the genome to the phenome through the transcriptome☆11Jun 28, 2020Updated 5 years ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago