Terraform template to create AWS resources to execute jobs using nextflow
☆21Mar 1, 2023Updated 3 years ago
Alternatives and similar repositories for tf-aws-env-nf
Users that are interested in tf-aws-env-nf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆20Mar 20, 2022Updated 4 years ago
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆12Mar 16, 2026Updated last month
- Differential Mutation Analysis☆11May 24, 2020Updated 5 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 4 months ago
- ☆15Jan 19, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆11Jun 29, 2021Updated 4 years ago
- Website and slides for intro to bioinformatics class at Fred Hutch☆13Jun 4, 2018Updated 7 years ago
- Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments☆10Mar 13, 2021Updated 5 years ago
- Minhash Index Extended to Knead Kmer Intersection☆11Mar 18, 2020Updated 6 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- ☆18Apr 20, 2025Updated 11 months ago
- ☆15Dec 8, 2022Updated 3 years ago
- Bioinformatics curated workflows that use Biocontainers tools☆19Jun 11, 2019Updated 6 years ago
- CAVA (Clinical Annotation of VAriants)☆14Sep 28, 2018Updated 7 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Suite of tools for use in genome assembly and consensus. Work in progress.☆31Mar 22, 2021Updated 5 years ago
- Linter rules for Nextflow DSL scripts☆34Mar 23, 2026Updated 3 weeks ago
- scRNA-seq workshop in Oxford on 9 September 2016☆11Sep 7, 2016Updated 9 years ago
- [DEPRECATED] Docker Images which include a complete installation of all software needed to build all Bioconductor packages☆26Mar 15, 2023Updated 3 years ago
- Cytometry by time-of-flight(CyTOF) data is very useful in studying the presence/absence of antigens/surface markers at single cell level.…☆14Jun 1, 2020Updated 5 years ago
- BiG-MEx implementation as Docker images and R packages☆13Feb 9, 2022Updated 4 years ago
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 3 weeks ago
- Nextflow plugin implementation skeleton☆11Sep 1, 2025Updated 7 months ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- a toolset for fast DNA read set matching and assembly using a new type of reduced kmer☆37Aug 4, 2021Updated 4 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated last year
- TOP results by CONfident efFECT Sizes.☆15Dec 9, 2024Updated last year
- ☆10Oct 31, 2022Updated 3 years ago
- Streaming sequence classification with web services ✓📌☆19Dec 8, 2022Updated 3 years ago
- Nextflow pipeline wrapper for executing Cell Ranger☆13Mar 8, 2022Updated 4 years ago
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆16Jun 28, 2025Updated 9 months ago
- Send R code/R scripts/shell commands to LSF cluster without leaving R☆26Mar 14, 2025Updated last year
- Histosketching Using Little Kmers☆57May 25, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer☆42Dec 16, 2025Updated 4 months ago
- A Go implementation of the strobemers (https://github.com/ksahlin/strobemers)☆14Apr 23, 2021Updated 4 years ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated last year
- COMET Single-Cell Marker Detection tool☆33Jun 21, 2022Updated 3 years ago
- ☆11Sep 7, 2023Updated 2 years ago
- A message queue for genomic surveillance☆20Oct 14, 2021Updated 4 years ago
- Luslab nextflow modules☆14Apr 30, 2021Updated 4 years ago