independentdatalab / tf-aws-env-nfLinks
Terraform template to create AWS resources to execute jobs using nextflow
☆22Updated 2 years ago
Alternatives and similar repositories for tf-aws-env-nf
Users that are interested in tf-aws-env-nf are comparing it to the libraries listed below
Sorting:
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆21Updated 4 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.☆22Updated 3 years ago
- R package for Enrichment Depletion Logos (EDLogos) and String Logos☆27Updated 6 years ago
- ☆12Updated last year
- Intersect multiple VCF files with haplotype awareness☆25Updated 4 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- An Expectation-Maximization algorithm to infer mutational signatures☆25Updated 8 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated this week
- ☆25Updated 4 years ago
- Using k-mers to call HLA alleles in RNA sequencing data☆23Updated 7 years ago
- Demonstrating best practices for bioinformatics command line tools☆26Updated 5 years ago
- Allele frequency filter app☆14Updated 3 years ago
- Converts 'MultiQC' Reports into Tidy Data Frames☆20Updated last year
- Lollipop-diagram to interactively visualize genetic mutations☆32Updated 10 months ago
- Numerical Encoding for Human Genetic Variants☆41Updated 2 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Simplifies parallel processing of DNA sequencing reads☆9Updated 10 months ago
- RNA-seq data comprehensive data analysis toolbox☆19Updated 2 years ago
- GitHub Action to launch a workflow using Nextflow Tower.☆12Updated 2 years ago
- Artisanal 🤣 bioinformatics tools and pipelines in Scala☆20Updated 5 years ago
- a Shiny/R application to view and annotate copy number variations☆28Updated 2 years ago
- RNA-seq for Mendelian disease diagnostics: A hands-on tutorial through bioinformatic tools and workflows☆17Updated 3 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 4 months ago
- Library for indexing VCF files for random access searches by rsID☆17Updated 2 weeks ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆33Updated 2 months ago