flo-compbio / gopcaLinks
GO-PCA: An Unsupervised Method to Explore Gene Expression Data Using Prior Knowledge
☆14Updated 7 years ago
Alternatives and similar repositories for gopca
Users that are interested in gopca are comparing it to the libraries listed below
Sorting:
- XL-mHG: A Semiparametric Test for Enrichment in Ranked Lists.☆14Updated 2 years ago
- ☆13Updated 3 years ago
- zero-inflated negative binomial gene expression in R☆20Updated 7 years ago
- Deconvolution of seed effects from gene effects in large scale RNAi screens☆11Updated 7 years ago
- Examples of kallisto + sleuth☆11Updated 8 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆43Updated 3 years ago
- Workflow for ZINB-WaVE + DESeq2 intergration for single-cell RNA-seq☆31Updated 4 years ago
- Tutorial for the analysis of scRNA-seq data in R☆18Updated 6 years ago
- Gene Set Enrichment Analysis (GSEA) is a computational method that determines whether an a priori defined set of genes shows statisticall…☆37Updated 4 months ago
- High-throughput gene to knowledge mapping through massive integration of public sequencing data.☆31Updated 6 years ago
- LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. E…☆24Updated this week
- Transcript quantification import with automatic metadata detection☆68Updated 3 weeks ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Updated 3 years ago
- Repository for signature genes from Immune Cell Atlas☆18Updated 5 years ago
- Create QC and summary reports for Alevin output☆32Updated 3 months ago
- GWAS gold standards repository☆37Updated last year
- JAMM Peak Finder for Sequencing Datasets☆29Updated 5 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 11 months ago
- IMSEQ - IMmunogenetic SEQuence Analysis☆15Updated 6 years ago
- ☆19Updated 8 years ago
- A Snakemake pipeline for quality control and reproducible processing of chromatin profiling data☆20Updated 4 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 5 years ago
- The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generat…☆28Updated 8 years ago
- Bioinformatics for Benched Biologists☆22Updated 5 years ago
- Chromatin segmentation in R☆19Updated 7 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆29Updated 6 years ago
- home of the bear's lair☆10Updated 8 years ago
- This is the ensembldb development repository.☆35Updated 10 months ago
- HSCI/Catalyst Single-cell RNA-Seq Workshop☆19Updated 6 years ago
- stageR package☆13Updated 2 years ago