bnediction / mpbnLinks
Brief Python implementation of Most Permissive Boolean Networks
☆19Updated 7 months ago
Alternatives and similar repositories for mpbn
Users that are interested in mpbn are comparing it to the libraries listed below
Sorting:
- Synthesis and Reprogramming of Most Permissive Boolean Networks☆13Updated 3 weeks ago
- A collection of 230+ Boolean networks from various sources useful for benchmarking or testing.☆13Updated 2 months ago
- The CoLoMoTo Interactive Notebook: Accessible and Reproducible Computational Analyses for Qualitative Biological Networks☆27Updated 2 weeks ago
- toolkit for the manipulation and analysis of Logical Qualitative Models of biological regulatory networks☆19Updated last week
- Static analyzer for dynamics of Automata Networks☆12Updated 4 years ago
- scBoolSeq: scRNA-Seq data binarisation and synthetic generation from Boolean dynamics☆13Updated last month
- CANAlization: Control & Redundancy in Boolean Networks☆25Updated 3 weeks ago
- Boolean Network Modeling☆40Updated 5 years ago
- PyBoolNet is a Python package for the generation, modification and analysis of Boolean networks.☆49Updated 10 months ago
- A collaborative review of the emerging COVID-19 literature. Join the chat here:☆118Updated last year
- Simulation and inference of gene regulatory networks based on transcriptional bursting☆12Updated 3 months ago
- This is the maintened version of PySankey (pySankeyBeta on Pypi)☆42Updated 2 weeks ago
- PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks☆27Updated this week
- Single cell network synthesis toolkit☆23Updated 4 years ago
- Python library for attractor identification and control in Boolean networks☆29Updated last year
- Methods for inferring undirected networks from data☆45Updated 4 years ago
- Sparse Signaling Pathway Sampling: MCMC for signaling pathway inference☆14Updated 2 years ago
- GeneNetwork (2nd generation)☆37Updated 2 weeks ago
- The R package manager that is blazingly fast ⚡. Powered by mamba.☆75Updated 2 years ago
- Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.☆23Updated last month
- AIRR Community Data Standards☆37Updated last week
- Systematically learn and evaluate manifolds from high-dimensional data☆101Updated this week
- A conda-smithy repository for r-base.☆15Updated 3 weeks ago
- HAL (Hybrid Automata Library) is the one-stop shop for all of your hybrid modeling needs☆36Updated last year
- PyIOmica (pyiomica) is a Python package for omics analyses.☆16Updated 3 months ago
- Learning causal or non-causal graphical models using information theory☆32Updated 2 months ago
- Prism themes for plotnine, inspired by ggprism.☆15Updated last month
- ☆17Updated last year
- A tool for creating Python implementations of SBML models.☆14Updated 2 years ago
- An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data☆52Updated 7 years ago