liuqivandy / scRNABatchQC
☆11Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for scRNABatchQC
- Predicted cell-cell interactions of the aging mouse brain☆19Updated 5 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆27Updated 6 months ago
- An R wrapper for too-many-cells, for clustering single cells and analyzing cell clade relationships with colorful visualizations.☆25Updated 4 years ago
- A GUI tool for easy and smooth visualisation and analysis of Spatial Transcriptomics datasets☆13Updated 3 years ago
- An R package for visualising cell-cell interactions☆41Updated 3 months ago
- R package for Flexible dot plots☆26Updated 2 years ago
- Cell type enrichment analysis using gene signatures and cluster markers☆9Updated 6 years ago
- Course Materials for Genomics Data Mining☆22Updated 2 months ago
- Uncovering cell identity genes using differential stability of expression in single cells.☆10Updated 4 months ago
- Automated marker-based annotation of cell types☆13Updated 2 years ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆14Updated 5 years ago
- CellR: single-cell RNA-Seq guided deconvolution of cellular composition from bulk-tissue RNA-Seq☆15Updated 3 years ago
- Repository for supplemental material of manuscripts☆18Updated 3 years ago
- rCASC: reproducible Classification Analysis of Single Cell Sequencing Data☆12Updated 4 months ago
- Moana: Robust cell type classification of single-cell RNA-Seq data☆22Updated 6 years ago
- CellAnn☆12Updated last year
- A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batch…☆34Updated 3 years ago
- Reconstruction of higher order chromatin from scRNA-seq and scATAC-seq☆12Updated last year
- Clone of the Bioconductor repository for the scRNAseq package.☆24Updated 5 months ago
- Bead-based single-cell atac processing☆31Updated 3 years ago
- Human brain, >200,000 nuclei☆24Updated 3 years ago
- A single-cell and spatial RNA-seq database for Alzheimer’s Disease☆19Updated 4 months ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Updated 4 years ago
- ☆29Updated 8 months ago
- A re-analysis of the [Single-cell transcriptomic analysis of Alzheimer’s disease](https://www.nature.com/articles/s41586-019-1195-2) usin…☆14Updated 11 months ago
- Access and Format Single-cell RNA-seq Datasets from Public Resources☆34Updated 6 months ago
- Method for identifying trait-relevant gene annotations from GWAS summary statistics.☆17Updated 2 years ago
- This repository contains HCA Benchmarking codes☆26Updated 5 years ago
- Dingpw / Endothelial-Cell-Heterogeneity-and-Microglia-Regulons-Revealed-by-A-Pig-Cell-Landscape-at-Single-cel☆15Updated 2 years ago
- Analysis of Single Cell Expression, Normalization and Differential expression☆12Updated 4 years ago