Visualization and annotation of phylogenetic trees
☆927Apr 9, 2026Updated 3 weeks ago
Alternatives and similar repositories for ggtree
Users that are interested in ggtree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Base Classes and Functions for Phylogenetic Tree Input and Output☆104Updated this week
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆97Jan 9, 2026Updated 3 months ago
- A grammar of graphics for comparative genomics☆760Feb 23, 2026Updated 2 months ago
- A universal enrichment tool for interpreting omics data☆1,199Updated this week
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆60Jan 8, 2026Updated 3 months ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Phylogenetic analysis in R☆213Apr 22, 2026Updated last week
- ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2☆588Jan 13, 2026Updated 3 months ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,543Apr 23, 2026Updated last week
- Make Complex Heatmaps☆1,490Apr 2, 2026Updated 3 weeks ago
- a complete reference book for treeio, tidytree and ggtree packages☆103Jul 13, 2022Updated 3 years ago
- Circular visualization in R☆1,012Nov 11, 2023Updated 2 years ago
- ☆230Feb 25, 2026Updated 2 months ago
- Automatically exported from code.google.com/p/figtree☆467Mar 20, 2026Updated last month
- Visualizing publication-quality multiple sequence alignment using ggplot2☆217Nov 1, 2025Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Phylogenetic orthology inference for comparative genomics☆854Jul 15, 2025Updated 9 months ago
- ChIP peak Annotation, Comparison and Visualization☆253Nov 4, 2025Updated 5 months ago
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,341Apr 24, 2026Updated last week
- Fast genome-wide functional annotation through orthology assignment☆730Mar 24, 2026Updated last month
- Combination matrix axis for 'ggplot2' to create 'UpSet' plots☆395Jan 23, 2026Updated 3 months ago
- Easily add significance brackets to your ggplots☆613Mar 29, 2026Updated last month
- phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; an…☆645Feb 27, 2026Updated 2 months ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆463Updated this week
- Repel overlapping text labels away from each other in your ggplot2 figures.☆1,258Apr 14, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- microbiome R package☆315Aug 19, 2025Updated 8 months ago
- A 'ggplot2' implement of Venn Diagram.☆313Jan 11, 2026Updated 3 months ago
- ☆348Mar 4, 2025Updated last year
- 'ggplot2' Based Publication Ready Plots☆1,242Feb 28, 2026Updated 2 months ago
- The Composer of ggplots☆2,595Aug 25, 2025Updated 8 months ago
- Accelerating ggplot2☆949Sep 15, 2025Updated 7 months ago
- Gene cluster comparison figure generator☆640Dec 22, 2025Updated 4 months ago
- An R package for downstream data analysis of microbiome omics data☆277Updated this week
- An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..☆828Aug 4, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A comprehensive R package for deep mining microbiome☆192Apr 2, 2026Updated 3 weeks ago
- R package for community ecologists: popular ordination methods, ecological null models & diversity analysis☆528Apr 20, 2026Updated last week
- Grammar of Graph Graphics☆1,113Aug 25, 2025Updated 8 months ago
- Enhancing {ggplot2} plots with statistical analysis 📊📣☆2,176Updated this week
- 🌈 Interactive analysis of metagenomics data☆449Sep 17, 2025Updated 7 months ago
- Bayesian Evolutionary Analysis by Sampling Trees☆273Mar 27, 2026Updated last month
- An analysis and visualization platform for 'omics data☆515Updated this week