Visualization and annotation of phylogenetic trees
☆928Apr 29, 2026Updated 2 months ago
Alternatives and similar repositories for ggtree
Users that are interested in ggtree are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Base Classes and Functions for Phylogenetic Tree Input and Output☆104Apr 30, 2026Updated 2 months ago
- Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”☆98Jun 4, 2026Updated last month
- A grammar of graphics for comparative genomics☆774Jul 3, 2026Updated 2 weeks ago
- A universal enrichment tool for interpreting omics data☆1,217Jul 9, 2026Updated last week
- A Tidy Tool for Phylogenetic Tree Data Manipulation☆61Jul 2, 2026Updated 2 weeks ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Phylogenetic analysis in R☆215Jul 6, 2026Updated 2 weeks ago
- ➡️️➡️️⬅️️➡️️ Draw gene arrow maps in ggplot2☆596Jul 5, 2026Updated 2 weeks ago
- a complete reference book for treeio, tidytree and ggtree packages☆103Jul 13, 2022Updated 4 years ago
- Make Complex Heatmaps☆1,523Apr 2, 2026Updated 3 months ago
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,581Jul 8, 2026Updated last week
- ☆233Jul 11, 2026Updated last week
- Circular visualization in R☆1,019Nov 11, 2023Updated 2 years ago
- Automatically exported from code.google.com/p/figtree☆483May 17, 2026Updated 2 months ago
- Visualizing publication-quality multiple sequence alignment using ggplot2☆219Jun 9, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Phylogenetic orthology inference for comparative genomics☆865Jul 15, 2025Updated last year
- ChIP peak Annotation, Comparison and Visualization☆257Apr 29, 2026Updated 2 months ago
- phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; an…☆651Feb 27, 2026Updated 4 months ago
- An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)☆2,400Jul 10, 2026Updated last week
- Fast genome-wide functional annotation through orthology assignment☆754May 22, 2026Updated last month
- Combination matrix axis for 'ggplot2' to create 'UpSet' plots☆398Jan 23, 2026Updated 5 months ago
- Easily add significance brackets to your ggplots☆614Mar 29, 2026Updated 3 months ago
- microbiome R package☆318May 12, 2026Updated 2 months ago
- RAxML Next Generation: faster, easier-to-use and more flexible☆471Jul 6, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Repel overlapping text labels away from each other in your ggplot2 figures.☆1,258Apr 14, 2026Updated 3 months ago
- ☆349Mar 4, 2025Updated last year
- A 'ggplot2' implement of Venn Diagram.☆314Jan 11, 2026Updated 6 months ago
- 'ggplot2' Based Publication Ready Plots☆1,251Jul 13, 2026Updated last week
- The Composer of ggplots☆2,610Aug 25, 2025Updated 10 months ago
- Gene cluster comparison figure generator☆648Dec 22, 2025Updated 6 months ago
- An R package for downstream data analysis of microbiome omics data☆284Jul 11, 2026Updated last week
- Accelerating ggplot2☆955Sep 15, 2025Updated 10 months ago
- An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..☆837May 20, 2026Updated 2 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- R package for community ecologists: popular ordination methods, ecological null models & diversity analysis☆537Updated this week
- Grammar of Graph Graphics☆1,116Aug 25, 2025Updated 10 months ago
- A comprehensive R package for deep mining microbiome☆195Apr 29, 2026Updated 2 months ago
- Enhancing {ggplot2} plots with statistical analysis 📊📣☆2,190Updated this week
- 🌈 Interactive analysis of metagenomics data☆453Sep 17, 2025Updated 10 months ago
- An analysis and visualization platform for 'omics data☆531Updated this week
- hybrid assembly pipeline for bacterial genomes☆648Jul 7, 2026Updated 2 weeks ago