Find clustered hits from a BLAST search
☆142Jan 16, 2026Updated 4 months ago
Alternatives and similar repositories for cblaster
Users that are interested in cblaster are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Gene cluster comparison figure generator☆641Dec 22, 2025Updated 4 months ago
- lsaBGC - Lineage Specific Analysis of Biosynthetic Gene Clusters☆41Sep 28, 2025Updated 7 months ago
- Plot bacterial gene maps and genome comparison plots from command line with genoPlotR and GenomeDiagram☆13Mar 10, 2026Updated 2 months ago
- Locate antiviral defence systems in prokaryotic genomes☆74Oct 22, 2024Updated last year
- A python pipeline to identify IS (Insertion Sequence) elements in genome and metagenome☆109Dec 5, 2025Updated 5 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Reorients assembled microbial sequences☆137Aug 21, 2025Updated 8 months ago
- Similarity networks of biosynthetic gene clusters☆168Apr 1, 2026Updated last month
- Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments☆109Dec 11, 2023Updated 2 years ago
- A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data☆100Aug 11, 2025Updated 9 months ago
- Rapid & standardized annotation of bacterial genomes, MAGs & plasmids☆642Updated this week
- A tool for classifying prokaryote protein sequences into COG(Cluster of Orthologous Genes) functional category☆83May 3, 2025Updated last year
- 🦠🧬🧑💻📇 Microbial genomes-to-report pipeline☆74Mar 14, 2026Updated 2 months ago
- BRICK creates a BRIG-like interactive data visualisation for bacterial genome annotations and comparisons☆21Dec 9, 2025Updated 5 months ago
- Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates☆86Jan 24, 2026Updated 3 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- An updated pipeline for pangenome investigation☆358May 13, 2026Updated last week
- skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.☆56Apr 29, 2026Updated 2 weeks ago
- Finding regions of similarity between plasmids☆17Nov 2, 2022Updated 3 years ago
- Creating plasmid maps inside ggplot.☆92Sep 2, 2025Updated 8 months ago
- ☆32Jan 27, 2026Updated 3 months ago
- Parse NCBI CD-search results to find and visualise the domain architecture of secondary metabolite synthases☆24Nov 9, 2022Updated 3 years ago
- Fast, robust ANI and aligned fraction for (metagenomic) genomes and contigs.☆250Updated this week
- RabbitTClust: enabling fast clustering analysis of millions bacteria genomes with MinHash sketches☆54May 10, 2026Updated last week
- Genome size estimation from long read overlaps☆89May 1, 2026Updated 2 weeks ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- geNomad: Identification of mobile genetic elements☆312Mar 29, 2026Updated last month
- Bifrost graph gene caller.☆98Apr 12, 2026Updated last month
- Systematic search of all known anti-phage systems.☆168May 5, 2026Updated 2 weeks ago
- Host depletion optimised for clinical metagenomic sequencing applications☆18May 7, 2026Updated last week
- Assemble bacterial isolate genomes from Nanopore reads☆132Jan 22, 2025Updated last year
- Rapid comparison and dereplication of genomes☆340Nov 10, 2025Updated 6 months ago
- Bioinformatic Tools for study Evolution of metabolic diversity☆41Feb 27, 2024Updated 2 years ago
- BEAV: Bacterial Element Annotation reVamped☆77Aug 21, 2025Updated 8 months ago
- Follow up to Grace Blackwell's 661k dataset, for 2023☆141Apr 10, 2026Updated last month
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- ultrafast taxonomic profiling and genome querying for metagenomic samples by abundance-corrected minhash.☆303Feb 3, 2026Updated 3 months ago
- Bioinformatics tool for Locus Visualisation☆166Mar 30, 2026Updated last month
- Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!☆184Mar 17, 2026Updated 2 months ago
- A tool for drawing ANI clustermap between all-vs-all microbial genomes☆93May 3, 2025Updated last year
- Targeted Detection and Reconstruction of Plasmids☆22May 7, 2024Updated 2 years ago
- Compute a pairwise SNP distance matrix from one or two alignment(s)☆26Sep 12, 2024Updated last year
- zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)☆71Mar 9, 2026Updated 2 months ago