Alternatives and similar repositories for onek1k_phase1

Users that are interested in onek1k_phase1 are comparing it to the libraries listed below

• weizhou0 / qtl
  ☆28Updated 2 weeks ago
• shengxin321 / HumanKidney_eQTL_and_snATAC-seq
  codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data
  ☆19Updated 4 years ago
• single-cell-genetics / limix_qtl
  ☆20Updated last year
• caleblareau / gchromVAR
  Cell type specific enrichments using finemapped variants and quantitative epigenetic data
  ☆45Updated last year
• jxzb1988 / MMQTL
  MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…
  ☆11Updated 2 months ago
• ay-lab / ATACProc
  ATAC-seq processing pipeline
  ☆33Updated 3 years ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆46Updated last year
• lkmklsmn / MitoTrace
  ☆17Updated last year
• francois-a / fastqtl
  Enhanced version of the FastQTL QTL mapper
  ☆66Updated 2 years ago
• hakyimlab / gtex-gwas-analysis
  ☆23Updated 3 years ago
• gqi / DAESC
  ☆11Updated 11 months ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆34Updated 5 years ago
• stjude / ROSE
  ROSE: RANK ORDERING OF SUPER-ENHANCERS
  ☆48Updated 10 months ago
• clagiamba / moloc
  ☆35Updated 4 years ago
• mcgilldinglab / MATES
  A Deep Learning-Based Model for Quantifying Transposable Elements in Single-Cell Sequencing Data
  ☆27Updated 2 months ago
• maxsonBraunLab / cutTag-pipeline
  Pipeline for Cut&Tag analysis
  ☆21Updated 2 months ago
• Japrin / scPip
  A pipeline for scRNA-seq data analysis
  ☆14Updated 3 months ago
• youqiongye / HAMFA
  Hypoxia associated molecular feature analysis
  ☆35Updated 5 years ago
• natsuhiko / rasqual
  Robust Allele Specific Quantification and quality controL
  ☆39Updated 3 years ago
• lhe17 / nebula
  ☆41Updated last week
• molgenis / scRNA-seq
  ☆18Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆53Updated last week
• Kyoko-wtnb / FUMA_scRNA_data
  Descriptions/scripts for pre-process and processed data for FUMA cell specificity analyses (scRNA-seq)
  ☆23Updated 5 years ago
• bowmanr / scDNA_myeloid
  Processing scripts for single cell DNA sequencing on the Tapestri platform
  ☆24Updated 2 years ago
• immunogenomics / SCENT
  Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA
  ☆74Updated 2 months ago
• jbryois / scRNA_disease
  Code for our paper: https://www.biorxiv.org/content/10.1101/528463v1
  ☆18Updated 5 years ago
• YangLab / SCAPTURE
  ☆19Updated last year
• KafsackLab / scRNAseq-Malaria
  Codes associated with the Poran, Nötzel et al. paper titled "Single-cell RNA-seq reveals a signature of sexual commitment in malaria para…
  ☆9Updated 7 years ago
• single-cell-genetics / cellSNP
  Pileup biallelic SNPs from single-cell and bulk RNA-seq data
  ☆77Updated 3 years ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆45Updated 5 years ago