sdentro / copykat_pipelineLinks
☆13Updated 2 years ago
Alternatives and similar repositories for copykat_pipeline
Users that are interested in copykat_pipeline are comparing it to the libraries listed below
Sorting:
- ☆22Updated 6 months ago
- ☆21Updated last year
- ☆62Updated 2 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Updated 2 years ago
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- Code used to process the data of the HBCA project☆32Updated last year
- cell type deconvolution for multi-condition bulk RNA-seq data☆30Updated 3 years ago
- ☆17Updated last year
- Custom codes accompanying single cell spatial transcriptomic study on the healthy human lung☆12Updated 2 years ago
- Code, data and analysis for moslin.☆15Updated last year
- Scanner of specific spatial patterns in tissues☆14Updated 3 years ago
- ☆11Updated last year
- STRIDE (Spatial TRanscRIptomics DEconvolution by topic modelling) is a cell-type deconvolution tool for spatial transcriptomics by using …☆26Updated 2 years ago
- ☆30Updated 8 months ago
- Deconvolution of spatial transcriptomics at single-cell resolution☆20Updated last year
- ☆17Updated last year
- CellWalkR: An R Package for integrating single-cell and bulk data to resolve regulatory elements☆21Updated 3 months ago
- scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells…☆16Updated last month
- R package for generalized binary covariance decomposition.☆14Updated 6 months ago
- ☆17Updated 4 years ago
- Hierarchical Cell Annotation☆26Updated last year
- ☆16Updated last year
- UHCA☆11Updated last year
- Analysis of imbalanced data and its impacts in a scRNA-seq integration setting☆31Updated 10 months ago
- ☆25Updated 2 years ago
- ☆23Updated 2 years ago
- Reproducibility code for the manuscript: 'Inferring and perturbing cell fate regulomes in human cerebral organoids☆30Updated 2 years ago
- R tools for analysis and visualization of single-cell subclustering data☆17Updated 4 months ago
- A record of the analysis pipelines used to create the HTAPP data☆34Updated 9 months ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year