Alternatives and similar repositories for MESuSiE:

Users that are interested in MESuSiE are comparing it to the libraries listed below

• jrs95 / geni.plots
  GENI plots to visualise results from genome-wide association studies
  ☆27Updated 4 months ago
• StatFunGen / pecotmr
  Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.
  ☆21Updated this week
• MRC-Epid / pGWAS_discovery
  Code repository for Pietzner M, Wheeler E, et al. 2021 "Mapping the proteo-genomic convergence of human diseases"
  ☆23Updated 3 years ago
• LizaDarrous / PheWAS-cluster
  ☆19Updated 6 months ago
• ylaboratory / seismic
  Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data
  ☆14Updated 2 months ago
• cnfoley / mrclust
  R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.
  ☆14Updated 3 years ago
• mancusolab / ma-focus
  MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets
  ☆26Updated 9 months ago
• szcf-weiya / MTWAS
  R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"
  ☆14Updated 7 months ago
• genomicsITER / PFgenetics
  Collaborative genetic studies of idiopathic pulmonary fibrosis
  ☆16Updated 2 weeks ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated 10 months ago
• ckhunsr1 / PUMICE
  PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics
  ☆12Updated last year
• jrs95 / gassocplot
  Regional association plots
  ☆26Updated 10 months ago
• RayDebashree / PLACO
  A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
  ☆33Updated 2 years ago
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆21Updated 4 months ago
• mglev1n / mrSampleOverlap
  Estimate Bias Due To Sample Overlap In Mendelian Randomization Studies
  ☆11Updated 2 years ago
• adriaan-vd-graaf / mrlink2
  MR-link 2 is a summary statistics _cis_ MR method that is pleiotropy robust.
  ☆13Updated 2 months ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 6 years ago
• dingruofan / xQTLbiolinks
  xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs
  ☆30Updated 2 weeks ago
• jokamoto97 / INTACT
  Integration of TWAS and Colocalization Analysis
  ☆15Updated 3 months ago
• YangLabHKUST / XPASS
  Cross-population analysis using GWAS summary statistics
  ☆18Updated 7 months ago
• juliedwhite / miamiplot
  An R package for creating ggplot2 based miami plots.
  ☆16Updated 11 months ago
• yanglab-emory / TIGAR
  ☆21Updated 3 months ago
• cnfoley / hyprcoloc
  R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data
  ☆47Updated 4 years ago
• cuelee / pleio
  ☆18Updated 11 months ago
• daiqile96 / OTTERS
  A powerful TWAS framework leveraging summary-level reference data
  ☆26Updated last month
• jinghuazhao / EWAS-fusion
  Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)
  ☆12Updated last year
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆16Updated 9 years ago
• jinghuazhao / INF
  SCALLOP-INF analysis
  ☆20Updated 5 months ago
• hailianghuang / FM-summary
  Fine-mapping method only using summary statistics
  ☆18Updated 8 years ago