Alternatives and similar repositories for MOSTWAS:

Users that are interested in MOSTWAS are comparing it to the libraries listed below

• dcalderon / rolypoly
  Method for identifying trait-relevant gene annotations from GWAS summary statistics.
  ☆17Updated 2 years ago
• oliviasabik / RACER
  An R package for generating comparative regional association plots
  ☆18Updated 3 months ago
• RebeccaFine / benchmarker
  Benchmarking gene and variant prioritization algorithms for GWAS data
  ☆15Updated 5 years ago
• bogdanlab / RHOGE
  Estimate genetic correlation using predicted expression
  ☆21Updated 7 years ago
• boxiangliu / locuscompare
  LocusCompare is an interactive visualization tool for comparing two genetic association datasets.
  ☆21Updated last year
• bvoightlab / ColocQuiaL
  Pipeline for multiplex computing of statistical colocalization via COLOC between GWAS and QTL data.
  ☆18Updated 2 years ago
• karltayeb / cafeh
  ☆13Updated 2 years ago
• mglev1n / locusplotr
  Create Regional Association Plots
  ☆11Updated 7 months ago
• RajLabMSSM / catalogueR
  Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).
  ☆13Updated 2 years ago
• sb452 / mr-code
  Code for implementing Mendelian randomization investigations
  ☆16Updated 9 years ago
• statgen / pheweb-rg-pipeline
  Genetic correlation calculation pipeline via summary statistics for PheWeb
  ☆13Updated 5 years ago
• natsuhiko / PHM
  Pairwise Hierarchical Model
  ☆17Updated 3 years ago
• FinucaneLab / fine-mapping-inf
  Fine-mapping with infinitesimal effects
  ☆14Updated last year
• SUwonglab / rss-net
  RSS-NET: Regression with Summary Statistics exploiting Network Topology
  ☆18Updated 6 months ago
• rujinwang / EPIC
  cEll tyPe enrIChment
  ☆14Updated 2 years ago
• Genentech / midasHLA
  R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping…
  ☆12Updated last year
• hakyimlab / phenomexcan
  PhenomeXcan: mapping the genome to the phenome through the transcriptome
  ☆11Updated 4 years ago
• yuanzhongshang / GIFT
  ☆18Updated 4 months ago
• jokamoto97 / INTACT
  Integration of TWAS and Colocalization Analysis
  ☆15Updated 4 months ago
• mikelove / mrlocus
  Older repo for MRLocus. See new website for software usage guide:
  ☆15Updated last year
• immunogenomics / IMPACT
  Code for creating cell-type-specific regulatory element annotation files
  ☆18Updated 9 months ago
• ZikunY / CARMA
  GWAS genetics Fine-mapping method
  ☆22Updated 5 months ago
• MRCIEU / PhenoSpD
  ☆18Updated 7 years ago
• szcf-weiya / MTWAS
  R package for "Multi-tissue Transcriptome-Wide Association Studies (MTWAS)"
  ☆14Updated 8 months ago
• hakha-most / gwas_eqtl
  ☆16Updated last year
• ckhunsr1 / PUMICE
  PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics
  ☆12Updated last year
• xqwen / ptwas
  ☆17Updated 3 years ago
• PejLab / Pantry
  Pan-transcriptomic phenotyping
  ☆14Updated 2 weeks ago
• izhbannikov / haploR
  haploR: utilities for mining Haploreg and other similar web-based tools
  ☆9Updated 11 months ago