An Efficient Multiple-Testing Adjustment for eQTL Studies that Accounts for Linkage Disequilibrium between Variants
☆11Oct 24, 2019Updated 6 years ago
Alternatives and similar repositories for eigenMT
Users that are interested in eigenMT are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Jan 20, 2023Updated 3 years ago
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Sep 1, 2018Updated 7 years ago
- Interactive eQTL visualizations☆14Dec 12, 2022Updated 3 years ago
- Toolkit for QTL mapping and meta-analysis.☆17May 24, 2022Updated 4 years ago
- Draw the Gene structure based on the GFF and gene's ID☆10Jun 13, 2020Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- eQTLHap: a comprehensive eQTL analysis tool.☆11Apr 15, 2021Updated 5 years ago
- Genotyping of segregating mobile elements insertions☆19Jul 29, 2021Updated 4 years ago
- This site provides information on conducting reproducible science using the R language.☆13Nov 2, 2016Updated 9 years ago
- 3’ Tag RNA-seq pipeline (Work in progress)☆10Mar 14, 2021Updated 5 years ago
- Pipeline for genetic epidemiology projects at Univsersity of Bristol☆15Updated this week
- Package to detect eQTLs jointly in multiple subgroups (e.g. tissues) via Bayesian Model Averaging.☆23Apr 16, 2018Updated 8 years ago
- Robust Allele Specific Quantification and quality controL☆41Dec 13, 2021Updated 4 years ago
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆27Jun 30, 2022Updated 3 years ago
- Learn tissue-specificity and tissue-sharing of genetic regulation across 49 tissues using constraint matrix factorization model☆22Oct 9, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A toolset to analyze genomic footprinting data☆20Dec 5, 2025Updated 6 months ago
- Structural variant caller for low-depth long-read sequencing data☆30Jan 6, 2025Updated last year
- Transposable element polymorphism identification☆34Jul 22, 2020Updated 5 years ago
- Dockerized Phoenix using docker-compose.☆10Jun 15, 2017Updated 8 years ago
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆35Updated this week
- Network Visualization using both GUI and Programming☆29May 27, 2025Updated last year
- scripts used for processing and analyzing data in the article.☆13Oct 31, 2019Updated 6 years ago
- Identify and annotate TE-mediated insertions in long-read sequence data☆48Mar 25, 2026Updated 2 months ago
- Visualization methods for omics dataset quality control☆10May 26, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆10Sep 11, 2020Updated 5 years ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆10Oct 17, 2013Updated 12 years ago
- A de novo prediction tool of chromatin accessible regions for plant genomes☆10Aug 12, 2021Updated 4 years ago
- Enabling differential allele-specific analysis☆11Dec 28, 2024Updated last year
- This toolkit deals with GEnomic sequence and genome structure ANnotation files between inbreeding lines and species.☆45Mar 2, 2023Updated 3 years ago
- ☆17Feb 9, 2020Updated 6 years ago
- MultiSKAT is an R-package focused at rare-variant analysis of continuous multiple phenotype data. This project contains the R-codes/funct…☆12Jun 11, 2019Updated 7 years ago
- A tool to infer TF regulators for gene modules.☆10May 11, 2021Updated 5 years ago
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- causal TWAS (cTWAS)☆51May 7, 2026Updated last month
- Web version of GenomeRunner☆11Nov 6, 2016Updated 9 years ago
- Code and simulations using interaction-LD score regression☆13Jul 2, 2024Updated last year
- ☆39Apr 21, 2026Updated last month
- Genome-Phenome Wide Association Study☆15Feb 7, 2023Updated 3 years ago
- xGAP is an efficient, modular, extensible and fault-tolerant pipeline for massively parallelized genomic analysis/variant discovery from …☆11Oct 21, 2020Updated 5 years ago
- R package for Empirical Bayes Factor Analysis.☆53Dec 4, 2024Updated last year