ZikunY / CARMA
GWAS genetics Fine-mapping method
☆22Updated 5 months ago
Alternatives and similar repositories for CARMA:
Users that are interested in CARMA are comparing it to the libraries listed below
- FLAMES: Accurate gene prioritization in GWAS loci☆31Updated 3 weeks ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Updated 11 months ago
- An R package for creating ggplot2 based miami plots.☆16Updated 3 weeks ago
- Estimate genetic correlation using predicted expression☆22Updated 7 years ago
- Cross-population fine-mapping☆34Updated 3 months ago
- Integration of TWAS and Colocalization Analysis☆15Updated 5 months ago
- ☆21Updated 2 months ago
- ☆18Updated last year
- Seismic R package. Discover cell type-trait associations in minutes for GWAS and single-cell RNA-sequencing data☆14Updated 4 months ago
- Tissue-Gene Fine-Mapping☆14Updated last week
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆22Updated 4 months ago
- Regional association plots☆25Updated last year
- This is a pipeline for calculating weights for TWAS☆30Updated 2 years ago
- Assessing enrichment of complex disease or trait associations among QTLs☆14Updated 4 years ago
- 🌓 Allele specific analyses across cell states and conditions☆10Updated 2 years ago
- ☆13Updated 3 weeks ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Updated 6 months ago
- Code supporting analyses in paper on fine-mapping AD loci☆15Updated 3 years ago
- ☆11Updated 2 years ago
- ☆32Updated last year
- Post-GWAS enrichment, colocalization, TWAS and Mendelian Randomization to integrate molecular QTL and GWAS.☆23Updated last week
- harmonization, liftover, and imputation of summary statistics from GWAS☆31Updated 4 years ago
- RSparsePro for robust fine-mapping in the presence of LD mismatch☆12Updated 4 months ago
- Create Regional Association Plots☆11Updated 8 months ago
- ☆18Updated 4 months ago
- Summary-level Unified Method for Modeling Integrated Transcriptome☆10Updated last year
- R package for investigating clustered heterogeneity in Mendelian randomization (MR) analyses.☆15Updated 3 years ago
- A powerful TWAS framework leveraging summary-level reference data☆27Updated this week
- Fine-mapping with infinitesimal effects☆16Updated last year