Gaius-Augustus / AugustusLinks
Genome annotation with AUGUSTUS
☆321Updated 3 months ago
Alternatives and similar repositories for Augustus
Users that are interested in Augustus are comparing it to the libraries listed below
Sorting:
- Eukaryotic Genome Annotation Pipeline☆366Updated 4 months ago
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆432Updated last month
- RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.☆282Updated 2 weeks ago
- Bacterial ribosomal RNA predictor☆259Updated 2 years ago
- Synteny and Rearrangement Identifier☆421Updated 6 months ago
- Pilon is an automated genome assembly improvement and variant detection tool☆371Updated 3 years ago
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆355Updated 3 months ago
- A tool for generating consensus long-read assemblies for bacterial genomes☆334Updated 2 months ago
- adapter trimmer for Oxford Nanopore reads☆375Updated last year
- Fast and accurate de novo assembler for long reads☆396Updated last year
- (Not Offical) BBMap short read aligner, and other bioinformatic tools.☆243Updated 4 years ago
- quality filtering tool for long reads☆374Updated 2 months ago
- Sequence correction provided by ONT Research☆486Updated 3 months ago
- An accurate GFF3/GTF lift over pipeline☆513Updated 2 years ago
- Fast Whole-Genome Similarity (ANI) Estimation☆436Updated 3 months ago
- Scan contig files against PubMLST typing schemes☆253Updated 3 years ago
- Tool to plot synteny and structural rearrangements between genomes☆329Updated 7 months ago
- SortMeRNA: next-generation sequence filtering and alignment tool☆278Updated 3 months ago
- Fast taxonomic classification of metagenomic sequencing reads using a protein reference database☆295Updated 6 months ago
- A tool to circularize genome assemblies☆248Updated last year
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆367Updated last month
- An overview of all nanopack tools☆272Updated 2 years ago
- TransDecoder source☆298Updated last month
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆395Updated 5 months ago
- the pangenome graph builder☆465Updated 3 months ago
- Finds SNP sites from a multi-FASTA alignment file☆268Updated 4 years ago
- Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on h…☆394Updated 3 weeks ago
- ☆267Updated 4 months ago
- Rapid comparison and dereplication of genomes☆315Updated last week
- Genome Assembly and Annotation Service code☆216Updated last year