Gaius-Augustus / AugustusLinks
Genome annotation with AUGUSTUS
☆312Updated 2 weeks ago
Alternatives and similar repositories for Augustus
Users that are interested in Augustus are comparing it to the libraries listed below
Sorting:
- Eukaryotic Genome Annotation Pipeline☆356Updated last week
- BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET/EP/ETP and AUGUSTUS in novel eu…☆416Updated 5 months ago
- Tool to plot synteny and structural rearrangements between genomes☆313Updated 3 months ago
- RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.☆265Updated 2 weeks ago
- Synteny and Rearrangement Identifier☆396Updated 2 months ago
- Fast and accurate de novo assembler for long reads☆390Updated last year
- (Not Offical) BBMap short read aligner, and other bioinformatic tools.☆235Updated 4 years ago
- An accurate GFF3/GTF lift over pipeline☆490Updated last year
- the pangenome graph builder☆439Updated last month
- Telomere-to-telomere assembly of accurate long reads (PacBio HiFi, Oxford Nanopore Duplex, HERRO corrected Oxford Nanopore Simplex) and O…☆352Updated 3 weeks ago
- 3D de novo assembly (3D DNA) pipeline☆213Updated last year
- Bacterial ribosomal RNA predictor☆247Updated last year
- Mummer alignment tool☆518Updated 5 months ago
- KrakenTools provides individual scripts to analyze Kraken/Kraken2/Bracken/KrakenUniq output files☆345Updated last year
- Tools for fast and flexible genome assembly scaffolding and improvement☆516Updated last year
- Pilon is an automated genome assembly improvement and variant detection tool☆367Updated 3 years ago
- TransDecoder source☆294Updated 9 months ago
- adapter trimmer for Oxford Nanopore reads☆366Updated last year
- Fast Whole-Genome Similarity (ANI) Estimation☆416Updated last year
- SortMeRNA: next-generation sequence filtering and alignment tool☆270Updated 6 months ago
- ☆257Updated last year
- NCBI Prokaryotic Genome Annotation Pipeline☆342Updated this week
- A tool for generating consensus long-read assemblies for bacterial genomes☆325Updated last year
- Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes☆376Updated last month
- Genome Assembly and Annotation Service code☆213Updated last year
- MCScanX: Multiple Collinearity Scan toolkit X version. The most popular synteny analysis tool in the world!☆259Updated 6 months ago
- ☆256Updated 3 weeks ago
- IQ-TREE software version 2: phylogenetics by maximum likelihood☆293Updated 2 months ago
- Sequence correction provided by ONT Research☆465Updated last month
- Fast genome analysis from unassembled short reads☆292Updated last year