Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data
☆33Oct 25, 2013Updated 12 years ago
Alternatives and similar repositories for dynamics-practical
Users that are interested in dynamics-practical are comparing it to the libraries listed below
Sorting:
- Inferring spatiotemporal dynamics of H5N1 influenza from sequence data☆10Sep 6, 2013Updated 12 years ago
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- baltic - adaptable lightweight tree import code for molecular phylogeny manipulation, analysis and visualisation. This fork will no longe…☆12Dec 18, 2019Updated 6 years ago
- variant discovery and annotation using GATK and Ensembl☆17Jun 27, 2013Updated 12 years ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Jul 24, 2019Updated 6 years ago
- Scalable relaxed clock phylogenetic dating☆28Sep 3, 2025Updated 5 months ago
- Reconstruction of transmission trees using genomic data☆72Sep 27, 2023Updated 2 years ago
- Main development repository for SpreadGL☆20Sep 30, 2024Updated last year
- R package for studying phylogenetically-informed movements (Dellicour et al. 2016, Bioinformatics; Dellicour et al., submitted)☆37Jan 4, 2026Updated last month
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3☆17Apr 28, 2023Updated 2 years ago
- ☆19Nov 24, 2025Updated 3 months ago
- Simulating virus evolution and epidemiology☆21Feb 22, 2022Updated 4 years ago
- Global phylogenies of SARS-CoV-2 sequences☆85Oct 24, 2023Updated 2 years ago
- Visualization tool for genetic reassortment☆21Nov 1, 2025Updated 4 months ago
- PhyDyn: Epidemiological modelling in BEAST☆21Dec 22, 2022Updated 3 years ago
- Lecture on viral phylodynamics☆11Oct 28, 2021Updated 4 years ago
- Posterior Analysis of Coalescent Trees☆14Aug 6, 2015Updated 10 years ago
- Set of tools for viral metagenomics.☆14Jan 21, 2026Updated last month
- Alignment editor for Mac OS X