sdwfrost / influenza-dynamics-practical-h5n1Links
Inferring spatiotemporal dynamics of H5N1 influenza from sequence data
☆10Updated 11 years ago
Alternatives and similar repositories for influenza-dynamics-practical-h5n1
Users that are interested in influenza-dynamics-practical-h5n1 are comparing it to the libraries listed below
Sorting:
- Scalable relaxed clock phylogenetic dating☆25Updated last week
- Tutorial on Bayesian phylogenetic analysis☆46Updated 7 years ago
- R We There Yet?☆31Updated 4 months ago
- Java software to analyse phylogeny-trait correlations in discrete traits, accounting for phylogenetic uncertainty via posterior sampling.☆12Updated 7 years ago
- ☆19Updated last year
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics☆20Updated 6 years ago
- Reconstruction of transmission trees using genomic data☆63Updated last year
- ggtree version of plotTree.R☆18Updated 6 years ago
- ☆12Updated 6 years ago
- Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)☆18Updated 3 years ago
- ☆67Updated 9 years ago
- Talk to the NCBI EUtils☆22Updated 4 years ago
- Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)☆19Updated 4 years ago
- Schloss Lab Tools for Reproducible Microbiome Research 💩☆31Updated last year
- Spatial Phylogenetic Reconstruction of Evolutionary Dynamics 3☆16Updated 2 years ago
- Lecture on viral phylodynamics☆12Updated 3 years ago
- Maximum Likelihood Amplicon Pipeline☆22Updated last year
- Create your own PanViz visualizations☆20Updated 7 years ago
- ☆27Updated last year
- Calculate distances between phylogenetic trees in R☆32Updated this week
- R code for writing Beast2 XML (especially morphology/tip-dating)☆11Updated last year
- Visualization tool for genetic reassortment☆21Updated 3 months ago
- ☆18Updated 3 years ago
- ☆12Updated 2 months ago
- Analysis of global migration patterns of seasonal influenza viruses☆22Updated 6 years ago
- R Data Exploration for Serratus☆15Updated 2 years ago
- An R-wrapper for lsd2☆9Updated 2 years ago
- K-mer Counting for Biological Sequence Analysis☆27Updated 6 years ago
- Implementation of the treeSeg algorithm as an R package.☆14Updated 3 years ago
- Reference Phylogeny for Bacterial and Archaeal Genomes☆25Updated 2 years ago