Galaxy tools and wrappers for sequence analysis
☆17Jun 11, 2024Updated 2 years ago
Alternatives and similar repositories for pico_galaxy
Users that are interested in pico_galaxy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Integrating influenza antigenic dynamics with molecular evolution☆12May 28, 2015Updated 11 years ago
- Build single sample pair-based (rule-based) classifiers using top-score pairs or random forest for multi-class problems.☆13May 1, 2023Updated 3 years ago
- Pipeline to perform the allele-specific expression analysis (based on the work by Skelly et al. 2011)☆12May 22, 2025Updated last year
- Contains a set of Galaxy Tools mostly written by the Galaxy Team.☆37Feb 20, 2026Updated 3 months ago
- Bitpacked sequence trait and implementation☆18Feb 27, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 笔记库☆24Feb 19, 2018Updated 8 years ago
- Nanopore read de-multiplexer☆13Mar 25, 2020Updated 6 years ago
- A mirror of https://bitbucket.org/weischen/pcawg-delly-workflow☆18Jan 22, 2020Updated 6 years ago
- R package: Evolutionary biology in R☆21Apr 30, 2026Updated last month
- ggtree version of plotTree.R☆18Nov 12, 2018Updated 7 years ago
- Common repository for scripts to generate trees from taxonomies. Currently includes ITIS, NCBI, and GBIF.☆16Nov 30, 2015Updated 10 years ago
- VESPA: Very large-scale Evolutionary and Selective Pressure Analyses☆15Mar 18, 2022Updated 4 years ago
- NanopolishComp is a Python3 package for downstream analyses of Nanopolish output files☆10Dec 22, 2020Updated 5 years ago
- QuasiModo: Assessing viral genomic analysis methods on HCMV strain mixture☆12Sep 22, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Virus discovery☆17May 27, 2026Updated 2 weeks ago
- Standard regression functions in R enabled for parallel processing over large data-frames.☆38Sep 24, 2023Updated 2 years ago
- ☆10Aug 29, 2023Updated 2 years ago
- ☆14Jan 20, 2016Updated 10 years ago
- A graph-inspired data structure for determining likely chains of sequences from breadcrumbs of evidence☆17Jun 29, 2021Updated 4 years ago
- ggplot2 geom for QR codes☆16Jul 27, 2021Updated 4 years ago
- ☆21Feb 15, 2025Updated last year
- Brief tutorial for using Snakemake to create and submit jobs on a HPC cluster.☆15Mar 22, 2022Updated 4 years ago
- A database for signatures of public genomic sources☆18Jan 1, 2026Updated 5 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆16Apr 17, 2026Updated last month
- Inferring spatiotemporal dynamics of the H1N1 influenza pandemic from sequence data☆33Oct 25, 2013Updated 12 years ago
- ☆12Feb 14, 2023Updated 3 years ago
- A tool to detect acquired AMR genes directly from long read sequencing data.☆28Jan 31, 2026Updated 4 months ago
- Applied Quantitative Methods course at the College of Charleston☆21Apr 2, 2026Updated 2 months ago
- Fast sequence distance estimates☆29May 29, 2026Updated 2 weeks ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- fastx-utils using klib☆19Sep 1, 2020Updated 5 years ago
- Computational Biology & Bioinformatics Resources☆16Sep 9, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Minimum plain text representation of kmer sets☆18Jan 30, 2025Updated last year
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆14Aug 6, 2022Updated 3 years ago
- FunctionaL Omics Processing platform☆13Jul 25, 2024Updated last year
- Software for detecting transposable element insertions from next-generation sequencing data☆11Feb 24, 2023Updated 3 years ago
- Galaxy Tool Shed repositories maintained and developed by the GalaxyP community☆36Jun 5, 2026Updated last week
- Visualising single-cell trajectories, including comparisons between two models 📈☆32Dec 9, 2021Updated 4 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago