Alternatives and similar repositories for tree-subset-shiny

Users that are interested in tree-subset-shiny are comparing it to the libraries listed below

• gmbecker / genbankr
  ☆20Updated last year
• ropensci / phylotaR
  An automated pipeline for retrieving orthologous DNA sequences from GenBank in R
  ☆24Updated last week
• ScientistJake / Shiny_BLAST
  ☆17Updated 7 years ago
• jennahamlin / tinselR
  An Amazing Shiny App
  ☆17Updated 3 years ago
• YuLab-SMU / tidytree
  A Tidy Tool for Phylogenetic Tree Data Manipulation
  ☆56Updated last year
• fkeck / bioseq
  A Toolbox for Manipulating Biological Sequences in R
  ☆23Updated 2 years ago
• kassambara / fastqcr
  fastqcr: Quality Control of Sequencing Data
  ☆74Updated 2 years ago
• lvulliard / BioCircos.R
  Htmlwidgets binding R commands to the BioCircos.js library
  ☆39Updated 6 years ago
• drostlab / metablastr
  Seamless Integration of BLAST Sequence Searches in R
  ☆31Updated last year
• ChrisLou-bioinfo / gg.gap
  Easy to define segments in y-axis for 'ggplot2'.
  ☆28Updated 5 years ago
• grunwaldlab / analysis_of_microbiome_community_data_in_r
  This is the source code for the "Analysis of Microbiome Community Data in R" ICPP 2018 workshop. The website is available at: https://gr…
  ☆16Updated last year
• gosling-lang / grosling
  R interface to 'Gos'
  ☆39Updated 2 years ago
• YuLab-SMU / ggtreeDendro
  Drawing 'dendrogram' using 'ggtree'
  ☆13Updated 3 months ago
• joey711 / shiny-phyloseq
  An interactive web application for demonstrating and using phyloseq.
  ☆60Updated 6 years ago
• mblstamps / stamps2018
  STAMPS 2018 course
  ☆15Updated 7 years ago
• GMOD / JBrowseR
  R interface to the JBrowse 2 Linear Genome View.
  ☆37Updated last year
• vallenderlab / MicrobiomeR
  A comprehensive and customizable R package for microbiome analysis.
  ☆23Updated 2 months ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• wejlab / MetaScope
  An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)
  ☆19Updated last week
• pfh / topconfects
  TOP results by CONfident efFECT Sizes.
  ☆14Updated 7 months ago
• grunwaldlab / poppr
  🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
  ☆71Updated last month
• GuangchuangYu / ggtree-current-protocols
  Using ggtree to Visualize Data on Tree-Like Structure
  ☆24Updated 5 years ago
• shaunpwilkinson / kmer
  K-mer Counting for Biological Sequence Analysis
  ☆27Updated 6 years ago
• tmbuza / iMAP
  iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
  ☆13Updated last year
• gjuggler / ggphylo
  Phylogenetic plots for R and ggplot
  ☆27Updated 12 years ago
• vsbuffalo / gplyr
  ☆18Updated 8 years ago
• federicomarini / ideal
  Interactive Differential Expression AnaLysis - DE made accessible and reproducible
  ☆29Updated 3 months ago
• gogleva / SecretSanta
  flexible pipelines for scalable secretome prediction, R package
  ☆12Updated 6 years ago
• likelet / VSOLassoBag
  A variable-selection oriented LASSO bagging algorithm for biomarker development in omic-based translational research
  ☆18Updated 2 years ago
• fmichonneau / phylobase
  An R package that provides a base S4 class for comparative methods, incorporating one or more trees and trait data
  ☆19Updated last year